Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10983
Subject:
XR_934470.2
Aligned Length:
3585
Identities:
1303
Gaps:
2282

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGAGGCGGGACCAGCCGCTGCCGTCTCCGTCTCGGTGTCCCGGCCCCTACAGCGCCCGGCAGCCGCGGCGGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCGGAAACTGTCGGGTGCGTCCCGTTCGGAGCCGCGCCGGCCGAGAAGGCGCCGAGGAGCAGCGAGGCGGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCTGTCCGGCCCGGACCCGCCGAGCGGCGTGCGCGCCCCCTCCCCGTAGCCTCGCGGCGCGGCCTCGCCCCGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTCCCGAGCTCATCGCGGGCCCACGGAGCGGCCCCGGAGGCCCGAGCGCGCCCACCTGAGCCCCCGCGCTGG  296

Query    1  ----ATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCG  70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCG  370

Query   71  AGTTCATGGCCAACCTCAGGCTCAGATTTGAAAAAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCGTTTCT  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTTCATGGCCAACCTCAGGCTCAGATTTGAAAAAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCGTTTCT  444

Query  145  GTGAACCCTTACAAGTTGTTGAACATCTATGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGAGCTGTATGA  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGAACCCTTACAAGTTGTTGAACATCTATGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGAGCTGTATGA  518

Query  219  GAGACCGCCTCACCTTTTTGCTATTGCGGATGCTGCTTACAAGGCTATGAAGAGGCGATCAAAAGACACTTGTA  292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAGACCGCCTCACCTTTTTGCTATTGCGGATGCTGCTTACAAGGCTATGAAGAGGCGATCAAAAGACACTTGTA  592

Query  293  TTGTGATATCAGGGGAAAGTGGAGCTGGTAAAACGGAAGCCAGTAAGTACATTATGCAGTATATTGCGGCCATC  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGTGATATCAGGGGAAAGTGGAGCTGGTAAAACGGAAGCCAGTAAGTACATTATGCAGTATATTGCGGCCATC  666

Query  367  ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTGAAGAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTGAAGAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC  740

Query  441  TTTTGGAAATGCCAAAACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAATACATGGATATCAACTTTGACT  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTTTGGAAATGCCAAAACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAATACATGGATATCAACTTTGACT  814

Query  515  TCAAGGGTGACCCTATTGGTGGGCATATCAATAACTACTTACTAGAAAAGTCTCGAGTGATTGTGCAACAGCCA  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCAAGGGTGACCCTATTGGTGGGCATATCAATAACTACTTACTAGAAAAGTCTCGAGTGATTGTGCAACAGCCA  888

Query  589  GGAGAAAGAAGCTTTCATTCTTTCTATCAGCTACTCCAAGGAGGTTCAGAACAAATGCTACGCTCTCTACATCT  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGAGAAAGAAGCTTTCATTCTTTCTATCAGCTACTCCAAGGAGGTTCAGAACAAATGCTACGCTCTCTACATCT  962

Query  663  CCAGAAATCCCTTTCATCCTACAACTATATTCATGTGGGAGCTCAATTAAAGTCTTCTATCAATGATGCTGCCG  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCAGAAATCCCTTTCATCCTACAACTATATTCATGTGGGAGCTCAATTAAAGTCTTCTATCAATGATGCTGCCG  1036

Query  737  AATTCAGAGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT  810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AATTCAGAGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT  1110

Query  811  TTGGCTGCTATTCTGCACTTGGGAAATTTAAAATTTGTAGTAGATGGTGACACGCCTCTTATTGAGAATGGCAA  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTGGCTGCTATTCTGCACTTGGGAAATTTAAAATTTGTAGTAGATGGTGACACGCCTCTTATTGAGAATGGCAA  1184

Query  885  AGTAGTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAAGCCCTTCTTTACCGGACTG  958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGTAGTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAAGCCCTTCTTTACCGGACTG  1258

Query  959  TGGCCACAGGCCGTGACATCATTGACAAGCAGCACACAGAACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCC  1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGGCCACAGGCCGTGACATCATTGACAAGCAGCACACAGAACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCC  1332

Query 1033  AAGGCAATATATGAGCGCCTTTTTTGTTGGATCGTTACTCGCATCAATGATATTATTGAGGTCAAGAACTATGA  1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAGGCAATATATGAGCGCCTTTTTTGTTGGATCGTTACTCGCATCAATGATATTATTGAGGTCAAGAACTATGA  1406

Query 1107  CACCACAATCCATGGGAAAAACACTGTTATTGGTGTCTTGGATATCTATGGCTTTGAAATCTTTGACAACAACA  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CACCACAATCCATGGGAAAAACACTGTTATTGGTGTCTTGGATATCTATGGCTTTGAAATCTTTGACAACAACA  1480

Query 1181  GTTTTGAACAATTCTGTATCAATTACTGCAATGAGAAACTGCAGCAGCTATTTATTCAGCTGGTTCTGAAGCAA  1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GTTTTGAACAATTCTGTATCAATTACTGCAATGAGAAACTGCAGCAGCTATTTATTCAGCTGGTTCTGAAGCAA  1554

Query 1255  GAACAAGAGGAATACCAGCGGGAAGGGATCCCCTGGAAACATGTGGGATTG-CTA-------------------  1308
            ||||||||||||||||||||||||||||||||||||||||||     |||| |||                   
Sbjct 1555  GAACAAGAGGAATACCAGCGGGAAGGGATCCCCTGGAAACAT-----ATTGACTACTTCAACAATCAGATCATT  1623

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1624  GTTGACCTCGTGGAGCAACAGCACAAAGGGATCATTGCAATCCTTGATGATGCTTGCATGAATGTCGGCAAAGT  1697

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1698  CACCGATGAAATGTTTCTTGAAGCACTTAACAGTAAATTGGGCAAACACGCCCATTTTTCCAGCCGAAAGCTCT  1771

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1772  GTGCCTCAGACAAAATTCTGGAGTTTGATCGAGATTTTCGAATTCGACATTATGCAGGCGATGTAGTCTATTCT  1845

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1846  GTCATTGGTTTTATTGACAAAAATAAAGATACTTTATTTCAAGATTTCAAGCGCCTTATGTATAACAGTTCAAA  1919

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1920  TCCTGTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAGCGACCTCTGACTGCTG  1993

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1994  CTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGACAACCTTGCATCAAAGGAACCATATTACGTTCGTTGC  2067

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2068  ATCAAACCCAATGACAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTAGAATATCTTGG  2141

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2142  ACTACTGGAAAATGTGAGAGTGCGTCGGGCAGGATTTGCCTTCCGCCAGACATACGAGAAGTTTCTTCACAGGT  2215

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2216  ATAAGATGATCTCTGAATTCACCTGGCCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAAACTAATT  2289

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2290  GAACGGTGTGGTTTTCAGGATGATGTAGCTTATGGGAAGACCAAAATTTTCATTCGAACACCCCGAACATTGTT  2363

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2364  TACCTTGGAAGAACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCTTTCTACAAAAGGTGTGGCGGGGCACCC  2437

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2438  TGGCCCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAAGTGAAG  2511

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2512  TCGTACATCCACGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCATGCGAGACTACGGGAAGCACGTGAAGTG  2585

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2586  GCCAAGCCCTCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGATGGAGAGCATCCC  2659

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2660  AGCTCATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTGAAG  2733

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2734  GGTCAAAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGGCAACTATCTTGCTTCAAAGCCAGATACACCTCA  2807

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2808  GACCTCAGGCACTTTTGTCCCTGTTGCTAATGAATTGAAACGGAAGGACAAATACATGAATGTCCTCTTTTCCT  2881

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2882  GTCACGTCCGTAAGGTAAATCGATTTAGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTAT  2955

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2956  AAAATGGATCCCACTAAACAGTACAAGGTGATGAAGACTATCCCTCTATACAATTTGACTGGTCTGAGTGTCTC  3029

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3030  CAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTCATTGTCTGCCTCTTCAGCAAAC  3103

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3104  AGCCAACCCATGAGAGTCGAATTGGAGAACTTGTTGGAGTGCTGGTGAATCATTTCAAGAGATAATTTCCCTAA  3177

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3178  AGTACATTCTGAGATGTGTTCTTGTCAGCAGTTGGGAGGAAAGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAA  3251

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3252  CCAGCTAAGAGGACCAGAGGGAACAGTGCCCAGCCTCACAAAGAGCCAGGAGTAGTTTCTGATCTAACAAGGCA  3325

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3326  GACTAAAGAACTTCGTCATTCACAGGAAACCATCTGCTTATACTCTGAATAAAATTCAAGAAAGCATAGATTCT  3399

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3400  ACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGAGAAACAAACAAAAGTGTTC  3473

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 3474  AATTATTTGAATGAAGTAAGGAAAGATATTTTAAAATGTAAATCAACATTAAAATCTGAAAATGGCACAGTTGA  3547

Query 1309  ---------------------------------  1308
                                             
Sbjct 3548  TATTGCAGAAAATAGAATTGATGTGAAAGGAAA  3580

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