Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11124
- Subject:
- XM_024446143.1
- Aligned Length:
- 2223
- Identities:
- 1518
- Gaps:
- 678
Alignment
Query 1 ATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGT 74
Query 75 GTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATT 148
Query 149 CCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTG 222
Query 223 CGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACA 296
Query 297 CACTGTTGCAGCGCA----------------------------------------GGGAGGA------------ 318
||||||||||||.|| ||||.||
Sbjct 297 CACTGTTGCAGCACAGCTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTG 370
Query 319 ---------------------------------------------ATCAATGCTGCT---------------CT 332
|||..||||||| ||
Sbjct 371 CATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACT 444
Query 333 GG-------------------------GGAA-------------------CA---------TGGAGGA------ 347
|| |||| || |||||.|
Sbjct 445 GGCCACTCGCTATTGCACACCTTATATGGAAGGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGC 518
Query 348 ---------------GGACA-------------------------ACTG------GAGG-------------TG 362
|||.| |||| |||| |.
Sbjct 519 CTTGGATCTCCTGATGGAGAATGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATC 592
Query 363 GCAT-----------------TT--------------CTACG------------------------------AC 375
|||| || ||||| ||
Sbjct 593 GCATAAGAGCAAAGAACACTGTTGTTGCCACAGGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCAC 666
Query 376 ACCAGCACTGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCAGCACTGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTT 740
Query 450 CCACCCCACAGGCATATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTA 523
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCACCCTACAGGCATATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTA 814
Query 524 ACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCT 888
Query 598 CGGTCGATGACTCTGGAGATCCGAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCA 671
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGGTCCATGACTCTGGAGATCCGAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCA 962
Query 672 CCACCTACCTCCAGAGCAGCTGGCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTTGCTGGCGTGG 745
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 963 CCACCTACCTCCAGAGCAGCTGGCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGG 1036
Query 746 ACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAG 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAG 1110
Query 820 GGGCAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTG 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGCAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTG 1184
Query 894 TGCCTCGGTACATGGTGCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTG 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGCCTCGGTACATGGTGCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTG 1258
Query 968 CCCTGAGCATCGAAGAGTCATGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCCTGAGCATCGAAGAGTCATGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCT 1332
Query 1042 GTCATGAATCTTGACAAATTGAGATTTGCTGATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAA 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTCATGAATCTTGACAAATTGAGATTTGCTGATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAA 1406
Query 1116 GTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGC 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGC 1480
Query 1190 TCTATGGAGACCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACAGACCTGGTGGAGACCCTG 1263
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1481 TCTATGGAGACCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTG 1554
Query 1264 GAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGC 1337
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1555 GAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGC 1628
Query 1338 GCATGCCAGGGAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGA 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCATGCCAGGGAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGA 1702
Query 1412 AGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTTTGTGGACGTTGGCACTGGGAAGGTCACTCTGGAA 1485
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|.||||
Sbjct 1703 AGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTTGGCACTGGGAAGGTCAGTGTGGA- 1775
Query 1486 TATAGACCCGTAATCGACAAAA-----------------------------------------CTT-------- 1510
.|.|||..|| ||.|.| |||
Sbjct 1776 -----GCTCGTTCTC-ACCACAGCCCAGCACCCACACGGCCCCGCCCAGGCCTGCGGGCTGGCCTTGCTGATGG 1843
Query 1511 TGAACGAGGCTGA-CTGTGCCACCG------------TCCCGCCAGCCATTCG--------------------C 1551
||||||.||..|| |.| |||| | |||||.||| ||||| |
Sbjct 1844 TGAACGGGGAAGAGCAG-GCCA--GATTTAAATCAACTCCCGACAG--ATTCGAGGCACCGCTGAAAAAGGCAC 1912
Query 1552 TCCTAC-------------------------------------------------------------------- 1557
|||.||
Sbjct 1913 TCCGACAGCAGTCGGGCTTCGGGCTGGAAACAGAATCCAGTTCCTGCAGGTGGTTCAGAGGAGCCTTAAGGAAG 1986
Query 1558 -------------------------------------------------------------------------- 1557
Sbjct 1987 GGTTGCTCCGTGGTGTGCGCCAGATGGACGTCACTGGGCAGGAGCAAGTGTCCAAGGCCTGGTGGTAGGGGAGG 2060
Query 1558 -------------------------------------------------------------------------- 1557
Sbjct 2061 AGATGATGATTGTGGACCTAGCGAGAAAGCATCTGTGGGGTGGGGACACACAGCCATTACCAGAAACCAGTCCC 2134
Query 1558 -------------------------------------------------------------------------- 1557
Sbjct 2135 ACGTTAAGGGAGCCCAGAAGAGACACCTCCCCTCTCCTCCCACGGGCTGGGCCAACTGGAAGCGTCTGCAGGGG 2208
Query 1558 --- 1557
Sbjct 2209 AGC 2211
