Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11149
Subject:
XM_017321477.1
Aligned Length:
2254
Identities:
978
Gaps:
1172

Alignment

Query    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA--TTAATGATTCCCGTATTCCC  812
                                                               |  |||.|||.||          
Sbjct    1  ---------------------------------------------------ATGTTACTGAGTC----------  13

Query  813  TCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTC-CCTCCAGGCTT-CAGCTATAAGGC  884
                  |||        .||||.|| |||        ||||.|.|.||| |||     ||| ||     |||  
Sbjct   14  ------TCA--------GGGCTTCA-CTG--------GGATGCGTGCTCACCT-----CTTGCA-----AAG--  52

Query  885  TGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCT  958
                    |||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||
Sbjct   53  --------GTGACCCTTACCCTGTTCAGCTGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCT  118

Query  959  TAGGCCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTG  1032
            |||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.
Sbjct  119  TAGGCCCACTCCAGCTGCAGCAGTTCTATGCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTC  192

Query 1033  CCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAG  1106
            |.||||.|||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||
Sbjct  193  CTAGGCCTACCCCAAGGCAACCTTGGTGCTGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAG  266

Query 1107  CCCACCACCCAAAAGC----------------------------------------------------------  1122
            .|||||||||||||||                                                          
Sbjct  267  TCCACCACCCAAAAGCAAGGATGAAGTGGCCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCA  340

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct  341  AATCACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCC  414

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct  415  TCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGT  488

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct  489  CACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGG  562

Query 1123  --------------------------------------------AAGGAAAAAACAACACTGGAGAGTCTGACT  1152
                                                        |||||||||||||||||||||||.||||||
Sbjct  563  TGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACT  636

Query 1153  CAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGA  1226
            |||||..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||||||
Sbjct  637  CAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGA  710

Query 1227  TTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCC  1300
            ||||||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.||||
Sbjct  711  TTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCC  784

Query 1301  ACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCT  1374
            |||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.||||||||.
Sbjct  785  ACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCC  858

Query 1375  GACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCC  1448
            |||||||||||.||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||
Sbjct  859  GACATGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCC  932

Query 1449  ATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGC  1522
            |||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.||||
Sbjct  933  ATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGC  1006

Query 1523  CAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGG  1596
            |||||||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.||.||
Sbjct 1007  CAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGG  1080

Query 1597  CAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCC  1670
            |||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|||||
Sbjct 1081  CAGGAAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCC  1154

Query 1671  TGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAG  1744
            ..|.||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||||.|
Sbjct 1155  CAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGG  1228

Query 1745  AGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAG  1818
            ||||.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||.|||
Sbjct 1229  AGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAG  1302

Query 1819  GCCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAG  1892
            ||.|||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||||||
Sbjct 1303  GCTGAGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAG  1376

Query 1893  TGACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            ||||||.||||||||.|||||.||||||||||||
Sbjct 1377  TGACAGCGAAAACCACATTGCGGGACAAGCCAAC  1410

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