Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11249
Subject:
NR_161422.1
Aligned Length:
2093
Identities:
1558
Gaps:
535

Alignment

Query    1  ----------------------------------------ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  AGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGC  74

Query   35  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTAC  148

Query  109  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACACATTAACACCGAA  182
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  149  ATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACA--------------------------------  190

Query  183  GTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCAGGGCTTATTTTGATATTTGAATGGTGGTATTTTC  256
                                                               |||||||||||||||||||||||
Sbjct  191  ---------------------------------------------------GATATTTGAATGGTGGTATTTTC  213

Query  257  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  214  GCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAAC  287

Query  331  AACTCTTCCAACA---------------------ACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  383
            |||||||||||||                     ||||||||||||||||||||||||||||||||||||||||
Sbjct  288  AACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGT  361

Query  384  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  362  ATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTC  435

Query  458  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  436  TTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGT  509

Query  532  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  CCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGC  583

Query  606  CTTGGAGATAAATG------------------------------------------------------------  619
            ||||||||||||||                                                            
Sbjct  584  CTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATCTGGGAGATAAAAT  657

Query  620  ---------AGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAGAAAAA  684
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658  TGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAGCAGAAAAA  731

Query  685  TTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCA  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  732  TTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCA  805

Query  759  GTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGCCAGAA  832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  806  GTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTGTGCCAGAA  879

Query  833  GACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTC  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  880  GACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCTTCTGAGTATGTTC  953

Query  907  AATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  AATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA  1027

Query  981  GTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCT  1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028  GTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCT  1101

Query 1055  CTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATT  1128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  CTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATT  1175

Query 1129  CATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGA  1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  CATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGA  1249

Query 1203  ACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGG  1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  ACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACACTGGAAGAGAGTGG  1323

Query 1277  AAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGG  1350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324  AAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCCCTTGGAAAAGGGG  1397

Query 1351  CACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTC  1424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  CACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTCTC  1471

Query 1425  AGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGG  1498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  AGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTCACAGCCATGCTGG  1545

Query 1499  CCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCC  1572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546  CCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCACTTTGTTTGCCCCC  1619

Query 1573  TTAAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATC-----  1641
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct 1620  TTAAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATCTGAGA  1693

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1694  GAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAG  1767

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1768  AAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAAATGTTCATGGACTATTCCATATTAAAAGCTG  1841

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1842  TTTTTGTTGTACAAAATTCACTGATGTTCAGTTCTATTTTATTTTGCCTTCAGAAAAGAAGAAAGTCAAAAATA  1915

Query 1642  --------------------------------------------------------------------------  1641
                                                                                      
Sbjct 1916  AAACTTTTGTGTATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAAT  1989

Query 1642  ---------------------  1641
                                 
Sbjct 1990  AAACCTTTGGATTTACCTTGA  2010

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