Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11447
- Subject:
- XR_001748536.1
- Aligned Length:
- 5679
- Identities:
- 153
- Gaps:
- 5526
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACGGCCGGTTCCTCTTTACATAACGGCGCGGGGCGGCATGGGCCCGGGCCACCGCCTCCGCCCGGCTGCCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGACTGTCGCGGCCCGCGGTGGCGACGGCGGCCGCTGCAAAGTTTCCCCGGCGGCGGCGGCCCGGGGGCGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTCCCGCAACTGTCAAGCGCTGGCGGCGGAAATGATGAGGCGCTGGCCATTTTCCGAGCCCGGGTTTCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGAGCCCCGCTCGAGCGAGCCGCGAGCGAGGAGCCGGCGGGCGGGAGAGGACGCGCCCAGGGCGGGGGCCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGCCCCCTCGGGATTTCGAGGGCCCGGGGGCGCGCGACGCCATGGGCCGGCCGGGCCCAGAGCTCCTGTCTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGCCCGGCCGCACCACCTGGGTCTCCGCCATGAACGGGCCTGCCCTGCAGCCCTCCTCGCCCTCTTCCGCGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCAGCCTCCCCGGCGGCGGCCCCGCGGGGCTGGAGCGAGTTCTGTGAGTTGCACGCCGTAGCGGCGGCCCGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCTGGCCCGCCAGTACTGGCTGTTCGCCCGGGAGCATCCGCAGCACGCGCCGCTGCGCGCCGAGCTGGTGTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGCAGTTCACCGACCTCTTCCAGCGCTACTTCTGCCGCGAGGTGCGCGACGGACGGGCGCCGGGCCGCGACTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCGGGACACAGGCCGTGGGCCCCCAGCCAAGGCCGAGGCGTCCCCGGAGCCAGGCCCCGGCCCCGCCGCCCCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCTGCCCAAGGCCCGCAGCTCTGAGGAGCTGGCCCCGCCGCGGCCGCCCGGGCCCTGCTCCTTCCAGCACTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCCGCAGCCTCCGCCACATCTTCCGCCGCCGCTCGGCCGGGGAGCTGCCAGCGGCCCACACCGCTGCCGCCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGGACCCCCGGAGAGGCTGCTGAGACCCCCGCCCGGCCTGGCCTGGCCAAGAAGTTCCTGCCCTGGAGCCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCGGGAGCCGCCACCCGAGGCGCTGAAGGAGGCGGTGCTGCGCTACAGCCTGGCCGACGAGGCCTCCATGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCGGGGCACGCTGGCAGCGCGGGAGGCTGGCGCTGCGCCGGGCCCCGGGCCCCGATGGCCCCGACCGCGTGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCTCTTCGACCCACCCAAGTGGCCAGAGCCTGAGCTGTCCAGGCTGAGGTTTCGACTGAAGCAGGGGTTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTGCGCCCATGTGCCCACACGCTGCAACCTGGCTGGAGCCTCTGGCATAGGACACCCATACCACCAGTCTTAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CACAAGAGGAAGGGGAGGGGCAAACCCCCTCCTGAGCAGATTCCCAACCGGAAGCAGCTGGCTCCTTGGCTGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGTGCCCCAGCACAGGAAGCATCTGCAGGAGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAACCTTTACACCTTTGTGCTGAAGGTGAAGGACCGGACAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACATCATCTTTGAGGTGGGAGACGAGCAGCAGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCTGGAGAGCACAGAAGCAGAGATGCATATTCCCTCAGCCCTAGAGCCTAGCACGTCCAGCTCCCCAAGGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGCACAGATTCCCTTAACCAAGGTGCTTCTCCTGGGGGGCTGCTGGACCCGGCCTGCCAGAAGACGGACCATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCTGTCCTGCTACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAGCTGCAGGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTGATGCTCATGGAGTGTTCCTGGTGCGGCAGAGCGAGACGCGGCGTGGGGAATACGTGCTCACTTTCAACTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCAGGGGATAGCCAAGCACCTGCGCCTGTCGCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCGGTCGTGGACATGCTCCACCACTTCCAGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CGGCTCTCCAGCTACGTGGTAGTCGTCTCCCAACCACCAGGTTCCTGCAACACGGTCCTCTTCCCTTTCTCCCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCTCACTGGGATTCAGAGTCCCTTCCTCACTGGGGTTCAGAGTTGGGCCTTCCCCACCTTAGTTCTTCTGGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTCCCCGGGGGCTCAGCCCAGAGGGTCTCCCAGGGCGATCCTCACCCCCCGAGCAGATCTTCCACCTGGTGCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCGCCCGAAGAACTGGCCAACAGCCTGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGACTCGGACTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAAATGGACTCATCCTCCCGGAGCCACCTGCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATTCCAGGCCTCAACAGCTGCCCTTGAGGAGCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCCTTCCAGAGAAAGATTTAAGGGACACTGTTAACTGCTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTGAAGGGCCCTCCTGTAGGTTTCATCTATCCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGAGGATGCCGCTAGCTCCTGCCCGGGGTCCCTATGCCCAGTCCCCGTTACTCTTAGAGAAAGGAGTTGGGGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGGCCAGAGCTGGCAGTGGAAACTTGTTCTCTTTTTCACTGACACTGTCACAGCGGATGACAGACTTTCTACG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGAGGAGGGGGGGATCATCAGGAAGCCCAGAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGGTCTGCTGTGTCCACACCACAGATGACCACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGTCAGAGGCACAAGCTGAAGGTCAAAAATGATTTAAAACATTTTACCTCAGACTAATTTCTTTAAAGGATTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGTTCAAAACTTAACCACTGCTTATTTCAGTGCACTGTTTCAACTAACACCCATGCTATTTTTGTAGTCAGAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAGCTATGCAAACCCTACCTAATTTACAGTCTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACCTGCCACTGAGTGGCCACTGTCCTTCCTAAATGTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAATTCAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCAATTACTGAAATAGGAGGGTGGCAAGAACAGTTCTATCCTGGTGCCTTACGAATAAAAAACTGGATTCTGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTACAGCAGCTTTACAGTGATAGTTAAATTAACTGGGGCTAGGGGAAGAGCAAGCAAAAAGGGAAGAAGGACTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTAGGCCCTTTCTAGTAAATCCTTCAGCAACAAGGCTGGCTTGGTGCCCTCCAAGCATCTAATGGCTTATTAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTATCCCACAAGTGGGTTTTAGGCTCCTTTTTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGAAACTCCTTTAATAGCCCACAATCAGTGTTCTGTTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCTATC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TATCTCCTTGCACACATGGGCACACACAATCTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATAC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAGTGATACAATTCATAGGGGGCTGGCTCCTCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGAGTCAGCTGCTCTTGGGTGCCAGCAGAGCCATTCAGTACAACCCCCAGGCTCACAGCAGTGGCTTCTAGGAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACTGGGAGTTTAGATCAGCTTTACAGATACATCGATCAGAGGCTAAAATGAAACCTCAGCCTAAAACTCATAGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACTGACTGCCTGGGAGGAGGGTTAGGTCTGCTTCTTCCACTTATACTTAGTCTCTGTGCTCCAAGAGGTCAAAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTTTGCTTCTAGAATTTCCTTGGGGTCTTTCAGAGGGTGGGGGAACAAACCCCTATGCACTTTTCTTTTTTTTT 3996
Query 1 --------ATGGAGTTTCTCTTGTCAACCGGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCAC 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 TTTTTGAGATGGAGTTTCTCTTGTCAACCGGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCAC 4070
Query 67 CTTCCTGGTTCAAGCGATTCTGCCTCGACCTCTCAAGTAGCTGGGATTACAAGCACCAGCCACCATGCCTGGCT 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 CTTCCTGGTTCAAGCGATTCTGCCTCGACCTCTCAAGTAGCTGGGATTACAAGCACCAGCCACCATGCCTGGCT 4144
Query 141 AATTTTGTATTTT------------------------------------------------------------- 153
|||||||||||||
Sbjct 4145 AATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAATGTCTGACCTCAGGTGA 4218
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4219 TCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGCGAGCCACCGCGCCCAGCCTACACCACTTTTAG 4292
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4293 TACCAACACTCTTGGGTGATTTCATGGACCCTAAAGCAGACCTGACACTGATCCAGATTTGCAGTCCATTTTTA 4366
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4367 AGGACACCTGTCTTTATTTCCTCAAAGTCAAGCAGCTTTCTCTGGAAAATGAATGCTAATTAGTGTGAACCAAA 4440
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4441 AGAGTAAGTAAGAGTCTGAAGTTTTTTTAAAGGAGAAAGCTTATTATGGAAAGTCACTGGTCCTCCCCTCCGCA 4514
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4515 CAGGAAAGGTACCCAGTAGATAATGAACCAAATTAAGTTCCCTCCCTCCAGCCAGAAGTTAAACATCTGGGATA 4588
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4589 TGACGTCTTCATGCCAGGGGCACTCATTTCTTAGCAGCCTCTCTACATACATCTCTCAGGTGGTGCCAAGAGGC 4662
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4663 ACACCAGGTAGAGCAAACTTAGCAGCTCTGACTAACAGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAGAT 4736
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4737 TTGGAAGGCACCCACCTCCAGACTGCTTCCCGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAAC 4810
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4811 TCCCATGGCTCTAGGAAGAAGTGACACTAAGCCAACACCTTTCTTTATGTGGGAGCAGAATCAGCTGATGAAGG 4884
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4885 GGTGGGCAGCAGTGTGGGGCAGGCACCCCACTGGCTGCAGCTAGCCCACCATAGGCACAGCACATCCCACCACT 4958
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4959 CTCCTTCCAGTCCTGACCAGGCCCCAGCCGGCAACTTCTACCGAGAGCCATGGCTCAACACCAAACTGGACAGT 5032
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5033 AGACATCATGATCCCTCCAGTTAGCTCTAATTACAGACCCCACCAGTACAGCTTGACAGCTCCCGGCACCATCC 5106
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5107 CTTCCTTCATCTGACTTATTGAACTTTTACAAACTAACAGTCACCAGCACCAAAGAATTAAGTCAACTAACCTG 5180
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5181 CCTTGAATTTTAGACCAGCAATCCATATGGCTTTATCTGGTATAAATCTTCTGCCTTTGATCATTTCTGGACCG 5254
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5255 TAGGAAAAAGGAATAGCAATCATTAAAATCTTGGGCCAGAGAACACTATTTTTACATAACAGTTTCTTAACCTA 5328
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5329 AAGTCAAGGCCTTGGACTCTTCCCTGAGGGTTGCCTGAGATTCCTTCATGCTTTCTATTCAGGACTAAGTCCCT 5402
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5403 TACTGCAAATGTGTTAGCTCTAACATCTCCCACAAGCTAGAGGAACTTGCGAGTATATTAACAAGGACACATCT 5476
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5477 GACATCCTGTGTTTGGTTAGAATATACAGCACATTGTGATAACATAAAGTGGATTCATCTTGTATCATTATAGG 5550
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5551 CAGAAGGTATTTGGCAAATTTTTATGTATTGTTTTATGTACTGTACAAGTAACTTATTCTTGAATAATGCAAAT 5624
Query 154 ------------------------------------------------------- 153
Sbjct 5625 TTTGCTATAATGTACAAATTGCTATATGTGAATTAAAAAGTTTTCAGAATCTTGA 5679
