Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11447
- Subject:
- XR_002957278.1
- Aligned Length:
- 5649
- Identities:
- 153
- Gaps:
- 5496
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCCGGTTCCTCTTTACATAACGGCGCGGGGCGGCATGGGCCCGGGCCACCGCCTCCGCCCGGCTGCCCGCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACTGTCGCGGCCCGCGGTGGCGACGGCGGCCGCTGCAAAGTTTCCCCGGCGGCGGCGGCCCGGGGGCGCATCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCGCAACTGTCAAGCGCTGGCGGCGGAAATGATGAGGCGCTGGCCATTTTCCGAGCCCGGGTTTCCTGCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCCGCTCGAGCGAGCCGCGAGCGAGGAGCCGGCGGGCGGGAGAGGACGCGCCCAGGGCGGGGGCCCGCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCCTCGGGATTTCGAGGGCCCGGGGGCGCGCGACGCCATGGGCCGGCCGGGCCCAGAGCTCCTGTCTCTCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCGGCCGCACCACCTGGGTCTCCGCCATGAACGGGCCTGCCCTGCAGCCCTCCTCGCCCTCTTCCGCGCCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCCTCCCCGGCGGCGGCCCCGCGGGGCTGGAGCGAGTTCTGTGAGTTGCACGCCGTAGCGGCGGCCCGGGAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCCCGCCAGTACTGGCTGTTCGCCCGGGAGCATCCGCAGCACGCGCCGCTGCGCGCCGAGCTGGTGTCGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGTTCACCGACCTCTTCCAGCGCTACTTCTGCCGCGAGGTGCGCGACGGACGGGCGCCGGGCCGCGACTACCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGACACAGGCCGTGGGCCCCCAGCCAAGGCCGAGGCGTCCCCGGAGCCAGGCCCCGGCCCCGCCGCCCCTGGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCCAAGGCCCGCAGCTCTGAGGAGCTGGCCCCGCCGCGGCCGCCCGGGCCCTGCTCCTTCCAGCACTTTCGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCAGCCTCCGCCACATCTTCCGCCGCCGCTCGGCCGGGGAGCTGCCAGCGGCCCACACCGCTGCCGCCCCCGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCCCCGGAGAGGCTGCTGAGACCCCCGCCCGGCCTGGCCTGGCCAAGAAGTTCCTGCCCTGGAGCCTGGCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGAGCCGCCACCCGAGGCGCTGAAGGAGGCGGTGCTGCGCTACAGCCTGGCCGACGAGGCCTCCATGGACAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGGCACGCTGGCAGCGCGGGAGGCTGGCGCTGCGCCGGGCCCCGGGCCCCGATGGCCCCGACCGCGTGCTGGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTCTTCGACCCACCCAAGTCTTATCACAAGAGGAAGGGGAGGGGCAAACCCCCTCCTGAGCAGATTCCCAACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAGCAGCTGGCTCCTTGGCTGCAGAGTGCCCCAGCACAGGAAGCATCTGCAGGGGGGACTCCTGGGGAGACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAGACAAACTCAGGCCTGGCTGGAAGAAAGAGCATCAGGAACAAGCCTTGAGTACCCCAACTTGGTCTCGTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTTCAAGGCCCAAGCTACAAGCAGCTTGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGAGATGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGACAACCTTTACACCTTTGTGCTGAAGGTGAAGGACCGGACAGACATCATCTTTGAGGTGGGAGACGAGCAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCTGAATTCATGGATGGCTGAGCTCTCGGAGTGCACAGGCCGAGGGCTGGAGAGCACAGAAGCAGAGATGCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTCCCTCAGCCCTAGAGCCTAGCACGTCCAGCTCCCCAAGGGGCAGCACAGATTCCCTTAACCAAGGTGCTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCTGGGGGGCTGCTGGACCCGGCCTGCCAGAAGACGGACCATTTCCTGTCCTGCTACCCCTGGTTCCACGGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCATCTCCAGAGTGAAAGCAGCTCAGCTGGTTCAGCTGCAGGGCCCTGATGCTCATGGAGTGTTCCTGGTGCGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGAGCGAGACGCGGCGTGGGGAATACGTGCTCACTTTCAACTTTCAGGGGATAGCCAAGCACCTGCGCCTGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTGACAGAGCGGGGCCAGTGCCGTGTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCACCACTTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCGCTCGCCCATCCCACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGCTACGTGGTAGTCGTCTCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAACCACCAGGTTCCTGCAACACGGTCCTCTTCCCTTTCTCCCTTCCTCACTGGGATTCAGAGTCCCTTCCTCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGGGGTTCAGAGTTGGGCCTTCCCCACCTTAGTTCTTCTGGCTGTCCCCGGGGGCTCAGCCCAGAGGGTCTCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGGGCGATCCTCACCCCCCGAGCAGATCTTCCACCTGGTGCCTTCGCCCGAAGAACTGGCCAACAGCCTGCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGACTCGGACTACGAAATGGACTCATCCTCCCGGAGCCACCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCGGGCCATAGACAATCAGTACACACCTCTCTGACCAGTGAGGAATTCCAGGCCTCAACAGCTGCCCTTGAGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCACAGGCAGAAGTGTGAACTTGTGAATGTAATTGATCTTTCCTTCCTTCCAGAGAAAGATTTAAGGGACACTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTAACTGCTCGTGCCAGTTTGGAAGTGACCCTTCTATTAGGCCTGTTGAAGGGCCCTCCTGTAGGTTTCATCTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCACCTGGCTTTCTCCTTATTGTTTACAGATGTAGTTCTTGTTAGAGGATGCCGCTAGCTCCTGCCCGGGGTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCTATGCCCAGTCCCCGTTACTCTTAGAGAAAGGAGTTGGGGTGAGGGCCAGAGCTGGCAGTGGAAACTTGTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCTTTTTCACTGACACTGTCACAGCGGATGACAGACTTTCTACGGGGAGGAGGGGGGGATCATCAGGAAGCCCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAACACTAACAAGCGGTTCTCCCATCTACCGTCAGTCCACATGGCAGGTCTGCTGTGTCCACACCACAGATGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CACATCTAATCCTGCTTCTACTCTCAGCTTTAGGACAAAAGCTCTGTCAGAGGCACAAGCTGAAGGTCAAAAAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GATTTAAAACATTTTACCTCAGACTAATTTCTTTAAAGGATTCAGGTTCAAAACTTAACCACTGCTTATTTCAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGCACTGTTTCAACTAACACCCATGCTATTTTTGTAGTCAGAAACAGCTATGCAAACCCTACCTAATTTACAGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGAGCCAGCATGCTGGCTTGTCTACTGCATCCTCGGGACAGTCACCTGCCACTGAGTGGCCACTGTCCTTCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAATGTCAAGAAGTGAAGTATGTCACCCTTTCAGGGAAATTCAGGCAATTACTGAAATAGGAGGGTGGCAAGAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAGTTCTATCCTGGTGCCTTACGAATAAAAAACTGGATTCTGGTTTACAGCAGCTTTACAGTGATAGTTAAATT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AACTGGGGCTAGGGGAAGAGCAAGCAAAAAGGGAAGAAGGACTCCTAGGCCCTTTCTAGTAAATCCTTCAGCAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAAGGCTGGCTTGGTGCCCTCCAAGCATCTAATGGCTTATTAAATTATCCCACAAGTGGGTTTTAGGCTCCTTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTTGAGCCAAAATGGAAGCTGGGAATCTGGTGCCATAACTAATGAGAAACTCCTTTAATAGCCCACAATCAGTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTCTGTTCTAGCTGGCTACTGCTTCACTGGATTGAGAATCTATCTATCTCCTTGCACACATGGGCACACACAAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTCCACCATCCAGGGAGGTCCTGAAGTCAAATCTCTATCTATACAAGTGATACAATTCATAGGGGGCTGGCTCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TCCCAGAACCTGTCTGGAGGCTCAGAAACGGGGGCAGTGACAGTGGAGTCAGCTGCTCTTGGGTGCCAGCAGAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CCATTCAGTACAACCCCCAGGCTCACAGCAGTGGCTTCTAGGAAACTGGGAGTTTAGATCAGCTTTACAGATAC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATCGATCAGAGGCTAAAATGAAACCTCAGCCTAAAACTCATAGGACTGACTGCCTGGGAGGAGGGTTAGGTCTG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTTCTTCCACTTATACTTAGTCTCTGTGCTCCAAGAGGTCAAATTTTTGCTTCTAGAATTTCCTTGGGGTCTTT 3922
Query 1 ----------------------------------------------------ATGGAGTTTCTCTTGTCAACCG 22
||||||||||||||||||||||
Sbjct 3923 CAGAGGGTGGGGGAACAAACCCCTATGCACTTTTCTTTTTTTTTTTTTTGAGATGGAGTTTCTCTTGTCAACCG 3996
Query 23 GGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTTCCTGGTTCAAGCGATTCTGCCTCGACC 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTTCCTGGTTCAAGCGATTCTGCCTCGACC 4070
Query 97 TCTCAAGTAGCTGGGATTACAAGCACCAGCCACCATGCCTGGCTAATTTTGTATTTT----------------- 153
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 TCTCAAGTAGCTGGGATTACAAGCACCAGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT 4144
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4145 CACCATGTTGGCCAGGCTGGTCTCGAATGTCTGACCTCAGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGG 4218
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4219 GATTACAGGCGCGAGCCACCGCGCCCAGCCTACACCACTTTTAGTACCAACACTCTTGGGTGATTTCATGGACC 4292
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4293 CTAAAGCAGACCTGACACTGATCCAGATTTGCAGTCCATTTTTAAGGACACCTGTCTTTATTTCCTCAAAGTCA 4366
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4367 AGCAGCTTTCTCTGGAAAATGAATGCTAATTAGTGTGAACCAAAAGAGTAAGTAAGAGTCTGAAGTTTTTTTAA 4440
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4441 AGGAGAAAGCTTATTATGGAAAGTCACTGGTCCTCCCCTCCGCACAGGAAAGGTACCCAGTAGATAATGAACCA 4514
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4515 AATTAAGTTCCCTCCCTCCAGCCAGAAGTTAAACATCTGGGATATGACGTCTTCATGCCAGGGGCACTCATTTC 4588
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4589 TTAGCAGCCTCTCTACATACATCTCTCAGGTGGTGCCAAGAGGCACACCAGGTAGAGCAAACTTAGCAGCTCTG 4662
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4663 ACTAACAGGCTGCAAAGTGCAAGTTCAGATTCTGTGGCAGAGATTTGGAAGGCACCCACCTCCAGACTGCTTCC 4736
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4737 CGTCCAAGTTACCAGGACAGCTCAAAAACATGCTGACAGAAAACTCCCATGGCTCTAGGAAGAAGTGACACTAA 4810
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4811 GCCAACACCTTTCTTTATGTGGGAGCAGAATCAGCTGATGAAGGGGTGGGCAGCAGTGTGGGGCAGGCACCCCA 4884
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4885 CTGGCTGCAGCTAGCCCACCATAGGCACAGCACATCCCACCACTCTCCTTCCAGTCCTGACCAGGCCCCAGCCG 4958
Query 154 -------------------------------------------------------------------------- 153
Sbjct 4959 GCAACTTCTACCGAGAGCCATGGCTCAACACCAAACTGGACAGTAGACATCATGATCCCTCCAGTTAGCTCTAA 5032
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5033 TTACAGACCCCACCAGTACAGCTTGACAGCTCCCGGCACCATCCCTTCCTTCATCTGACTTATTGAACTTTTAC 5106
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5107 AAACTAACAGTCACCAGCACCAAAGAATTAAGTCAACTAACCTGCCTTGAATTTTAGACCAGCAATCCATATGG 5180
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5181 CTTTATCTGGTATAAATCTTCTGCCTTTGATCATTTCTGGACCGTAGGAAAAAGGAATAGCAATCATTAAAATC 5254
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5255 TTGGGCCAGAGAACACTATTTTTACATAACAGTTTCTTAACCTAAAGTCAAGGCCTTGGACTCTTCCCTGAGGG 5328
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5329 TTGCCTGAGATTCCTTCATGCTTTCTATTCAGGACTAAGTCCCTTACTGCAAATGTGTTAGCTCTAACATCTCC 5402
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5403 CACAAGCTAGAGGAACTTGCGAGTATATTAACAAGGACACATCTGACATCCTGTGTTTGGTTAGAATATACAGC 5476
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5477 ACATTGTGATAACATAAAGTGGATTCATCTTGTATCATTATAGGCAGAAGGTATTTGGCAAATTTTTATGTATT 5550
Query 154 -------------------------------------------------------------------------- 153
Sbjct 5551 GTTTTATGTACTGTACAAGTAACTTATTCTTGAATAATGCAAATTTTGCTATAATGTACAAATTGCTATATGTG 5624
Query 154 ------------------------- 153
Sbjct 5625 AATTAAAAAGTTTTCAGAATCTTGA 5649
