Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11568
Subject:
XM_006711137.1
Aligned Length:
2044
Identities:
575
Gaps:
1457

Alignment

Query    1  ATGCCGGAGCCCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCAGATGCCTCCCAGGGGAGCAGATCCTAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATGGGCCCCAGGGGTGAGGAAGGGCCTGGAACCAGAATTGTCTGGAACCCTGATCTGTACCAACTTTAGGGTCA  148
                                                 .||.||    |||                 |||||||
Sbjct    1  -------------------------------------ATGCCT----CCC-----------------AGGGTCA  16

Query  149  CCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACAGTGAATACGATTTTGCCCTGGTCAAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   17  CCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACAGTGAATACGATTTTGCCCTGGTCAAC  90

Query  223  ATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCCTCCGTCCAGGGTCCCTGCATAAATTTAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   91  ATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCCTCCGTCCAGGGTCCCTGCATAAATTTAT  164

Query  297  CCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  165  CCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGC  238

Query  371  CTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  239  CTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGG  312

Query  445  ATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  313  ATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGA  386

Query  519  CTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  387  CTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAG  460

Query  593  CCACCAGCCTCCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  461  CCACCAGCCTCCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCAC  534

Query  667  TTTCATCAGGGCCGTGGACCGGTCAGTGTGATGG--------TTAGGGTAATG---------GCTGTGGAT---  720
            |||||||||||||||||||||..| .|||..|||        |..|||.|.||         ||||||||.   
Sbjct  535  TTTCATCAGGGCCGTGGACCGCGC-TTGTCCTGGCATCACCCTGGGGGCAGTGATCTTCTCCGCTGTGGAGGCT  607

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  608  TCTATACAGCCAGTGACCCTAACAAGGAGGATATCAGAGCAGTGGAGTTGATGCTCCAGGCTGGGCATTCAGAT  681

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  682  GTTGTCCTGGTAGACACTATGGATGAGCTGCCCAGCCTTGCAGATGTCCAACTTGCCCACCTGAGGCTGAGGGC  755

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  756  CCTCTGCCTGCCTGATTCATCTGTAGCTGAGGATAAATGGCTTTCAGCCCTGGAAGGAACACGATGGCTGGACT  829

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  830  ATGTCAGGGCTTGTCTTCGAAAGGCCAGTGACATTTCAGTATTAGTGACATCCAGGGTTCGTTCTGTAATACTT  903

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  904  CAAGAGCGCGGTGATCGTGATCTCAATGGCCTCCTCTCTTCACTCGTCCAGCTGCTTTCAGCCCCCGAAGCCCG  977

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct  978  AACACTGTTTGGCTTCCAATCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCCCTTCCTGACTCGGCTTG  1051

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1052  GGGGAACTGGGGCCAGTGAAGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCTGGCAGCTCCTCCAGCAG  1125

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1126  TTTCCAGCTGATTTTGAATTCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTCAGGGTTCCTGACACCCT  1199

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1200  TACCTTCCTGAGAAATACCCCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAACTCCTATACACAAGTCTACA  1273

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1274  CCCCAGGATACTCCCAGCCTCCAGCTGGGAACTCTTTTAACCTGCAGCTGTCTGTCTGGGACTGGGATTTACGT  1347

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1348  TATAGCAATGCACAGATACTACAATTCCAGAATCCTGGCTATGACCCAGAACACTGTCCAGATTCCTGGCTCCC  1421

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1422  TAGACCACAGCCAAGCTTCATGGTTCCTGGACCCCCCAGTTCTGTGTGGCTCTTCTCTAGAGGAGCATTGACCC  1495

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1496  CCCTGAATCAGCTCTGTCCTTGGCGGGACAGTCCTTCCCTGCTGGCAGTCTCTTCTCGTTGGCTCCCTCGACCT  1569

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1570  GCTATCTCCTCTGAAAGCCTGGCTGACCAGGAATGGGGTCTCCCCTCACATTGGGGAGCTTGCCCTTTACCTCC  1643

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1644  AGGGCTGCTGCTGCCTGGGTATCTGGGACCCCAGATCAGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTG  1717

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1718  AGGTCCAGATGGGCCTCTCAGCTCCCACAATCTCTGGCCTCCAGGATGAGCTATCCCATCTTCAGGAGTTATTA  1791

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1792  CGGAAATGGACACCAAGAATATCTCCTGAGGATCACTCCAAGAAAAGAGATCCACATACCATTCTCAATCCCAC  1865

Query  721  ----------------------------------------------  720
                                                          
Sbjct 1866  TGAAATTGCTGGCATTCTCAAAGGCAGGGCAGAGGGGGATCTGGGG  1911

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