Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11568
Subject:
XR_426760.4
Aligned Length:
2728
Identities:
709
Gaps:
2009

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAACTCTGCTCCGTGCACGTCAAATGCTCCTTTCCCTTGTGTCCAACCCCCTACCCCTCTCCCTAACACCCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCTCAACAAGACTCAGCCTCTCCCCGAGGTGGGTGAGCATCCTTGAGGTTTCCCACCCTTAACTGCTGTGTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGATGGAGCCAGAGAAATGTGGTGGGGGGGCCGGGGCCAGAGTTTCAACATTGCCCCCCAGAAGGAGGAGCC  222

Query    1  ----------------------------ATGCCGGAGCCCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGAGATGGGGTCTGTCCAGGAAAATAGGATGCCGGAGCCCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCA  296

Query   47  GATGCCTCCCAGGGGAGCAGATCCTAGCATGGGCCCCAGGGGTGAGGAAGGGCCTGGAACCAGAATTGTCTGGA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GATGCCTCCCAGGGGAGCAGATCCTAGCATGGGCCCCAGGGGTGAGGAAGGGCCTGGAACCAGAATTGTCTGGA  370

Query  121  ACCCTGATCTGTACCAACTTTAGGGTCACCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAA  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCCTGATCTGTACCAACTTTAGGGTCACCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAA  444

Query  195  CAGTGAATACGATTTTGCCCTGGTCAACATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCC  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGTGAATACGATTTTGCCCTGGTCAACATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCC  518

Query  269  TCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGA  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGA  592

Query  343  GTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCA  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCA  666

Query  417  GAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCAC  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCAC  740

Query  491  CAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTC  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTC  814

Query  565  AGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCTCCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGA  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCTCCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGA  888

Query  639  CAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGGGCCGTGGACCGGTCAGTGTGATGG--------TTAG  704
            |||||||||||||||||||||||||||||||||||||||||||||||||..| .|||..|||        |..|
Sbjct  889  CAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGGGCCGTGGACCGCGC-TTGTCCTGGCATCACCCTGGG  961

Query  705  GGTAATG---------GCTGTGGAT-------------------------------------------------  720
            ||.|.||         ||||||||.                                                 
Sbjct  962  GGCAGTGATCTTCTCCGCTGTGGAGGCTTCTATACAGCCAGTGACCCTAACAAGGAGGATATCAGAGCAGTGGA  1035

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1036  GTTGATGCTCCAGGCTGGGCATTCAGATGTTGTCCTGGTAGACACTATGGATGAGCTGCCCAGCCTTGCAGATG  1109

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1110  TCCAACTTGCCCACCTGAGGCTGAGGGCCCTCTGCCTGCCTGATTCATCTGTAGCTGAGGATAAATGGCTTTCA  1183

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1184  GCCCTGGAAGGAACACGATGGCTGGACTATGTCAGGGCTTGTCTTCGAAAGGCCAGTGACATTTCAGTATTAGT  1257

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1258  GACATCCAGGGTTCGTTCTGTAATACTTCAAGCTGCTTTCAGCCCCCGAAGCCCGAACACTGTTTGGCTTCCAA  1331

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1332  TCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCCCTTCCTGACTCGGCTTGGGGGAACTGGGGCCAGTGA  1405

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1406  AGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCTGGCAGCTCCTCCAGCAGTTTCCAGCTGATTTTGAAT  1479

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1480  TCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTCAGGGTTCCTGACACCCTTACCTTCCTGAGAAATACC  1553

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1554  CCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAACTCCTATACACAAGTCTACACCCCAGGATACTCCCAGCC  1627

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1628  TCCAGCTGGGAACTCTTTTAACCTGCAGCTGTCTGTCTGGGACTGGGATTTACGTTATAGCAATGCACAGATAC  1701

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1702  TACAATTCCAGAATCCTGGCTATGACCCAGAACACTGTCCAGATTCCTGGCTCCCTAGACCACAGCCAAGCTTC  1775

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1776  ATGGTTCCTGGACCCCCCAGTTCTGTGTGGCTCTTCTCTAGAGGAGCATTGACCCCCCTGAATCAGCTCTGTCC  1849

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1850  TTGGCGGGACAGTCCTTCCCTGCTGGCAGTCTCTTCTCGTTGGCTCCCTCGACCTGCTATCTCCTCTGAAAGCC  1923

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1924  TGGCTGACCAGGAATGGGGTCTCCCCTCACATTGGGGAGCTTGCCCTTTACCTCCAGGGCTGCTGCTGCCTGGG  1997

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 1998  TATCTGGGACCCCAGATCAGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTGAGGTCCAGATGGGCCTCTC  2071

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2072  AGCTCCCACAATCTCTGGCCTCCAGGATGAGCTATCCCATCTTCAGGAGTTATTACGGAAATGGACACCAAGAA  2145

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2146  TATCTCCTGAGGATCACTCCAAGAAAAGAGATCCACATACCATTCTCAATCCCACTGAAATTGCTGGCATTCTC  2219

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2220  AAAGGCAGGGCAGAGGGGGATCTGGGGTAGAGGAGGGTTCTGTCTAATCTTTTTTTTTTTTTTTTGTATCTGCA  2293

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2294  CTTGCAGCCTCAGCTTTCACACTTCAGCCCTTAAGTTCACTAAGAAGGTCTGAGTTTCTGCTGCAGATAGTGGT  2367

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2368  GTTAACTGCTCCAACTCTTGTCTTGCTTAGTTTCTACAAATATTTTTGCTTCTTGTCATTTGAAGGATTAAGAA  2441

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2442  ACAAAAACAATCCAGAAATTGATCGGTTTTTTTAGGCCAATCCCATCCCTTCTGGATAACCAGATGTTAAATCA  2515

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2516  TGAGATCAGAGATGCTGTTCATCAGTCCCAACAAGATGGCCTAGAAATCGCATTCTCACCTCGCCTTGCTGCTG  2589

Query  721  --------------------------------------------------------------------------  720
                                                                                      
Sbjct 2590  CTTTAATTCCAAGTTCTATTTCTTCCCTTATAGTTTTCTATGGGAATGAGGCGGATACAGGAAACACCCTATCT  2663

Query  721  ----------------------------------------------------------------  720
                                                                            
Sbjct 2664  CCTCTGTATTTTTGTAGTGGAATTTCTATTTAAGGGGCTCATTAAAGCATAGTATTTATACACA  2727

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