Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11616
Subject:
NR_033849.1
Aligned Length:
2743
Identities:
171
Gaps:
2545

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCGCTAGGAAACGAGCGAGCCCGACGCCAGGGGCGGAGCTCTGGCCTCCTCGCCGAGTTGGGGGAGGCAGGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGACAGGAGAATGGACAGTAAGAAGGGGAGACCCAAAGCTGCAGCTGGGAAGTGGCAGACGCTCCACCCTGGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAAGACAAGAGCTGCTGCTGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGATGGAGTTTCGCTCTGTTGCCAGGCTGGAGTGCACTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGCTTGGCTCACTGCTACCTCCGCCTCCCAGGTTCAGGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTACAGGCACCCACCACCACACCCAGCTAGTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATGGTCTCGATCTCTTGACCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCAGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTTCCTGGCCTAAGGTCAGCTGATTAGCAACCTTAGTTCATCTGCAGTCTCCATTCTCTTTTTGCTGAATCAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCAAGTATTCACAAGTTCCAGGGGGCAGGAGGTGGACATCTTTGGGGGACATTATTCCGCCCACCAGAAAACC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTGAAGATGAACTGCTTCTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACCCTCCCGAGCGAGGATATTGAGAAGAAAGAATTTGCCAAGATGCTAGTCACACACCAAGTACAGAGGCTATG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTGGTCGGCTGCAGCAAAAAGACCACTCGCGGCGTGGCAGCTCTCACTGGCCCTGCTGCCTCTTCAAGTTGACT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAGGTGAATCTAATGGAGATGGAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCACCACACCTGCTTCCCTGGTCTCTGATGTTGGTGTTAACCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCAGGCTCACTGTCTTGCTGGAGGGAGGAAGTTCCACAGGCTCTCACTTGGTTCTTTCTGCCGTAACAACCCTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACTCCTCCGGCCAAGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAATGTGTATCCCAATAAACAGGGCAGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCTACAGACCCACTGGACCCACTAGAGATGGACTTGGGCCACAGTGCCTTCCATGACTTCAGTAAACAGAGGGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGTGGTGATCTTGTCAAAGTCCTGGCGTCAATGTCAGTGTCCGGCTACACACCATGTTCCCGTCCTCGAAAAGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTCTCTGTACCCCTCTATGTTGGTGACACAACCCTGGCAAATGGCCACAGACTCCTTTGGGGACAGAGTAGGAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CGTAACTGGTGGGAGTGGTTGGCATGCTTTGTATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTTTGGCAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGTGAGAGACTGTGGCAGCTGCTGTCCGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTGGCAGAGCCTGACGTGTCTCTGATCATACTCACTGGGTCAGCAACACCCTACTGACCTTGTCCAGAATCCCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CATCCCAGTTGATATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAG  1776

Query    1  -------------------------------------------------------------------ATGGAGT  7
                                                                               |||||||
Sbjct 1777  TCACCACAGAGCTCCTGCCAGGAGTTCACTCATTCGTGCATTTCTTCCTTTTTTTTTTCTTTTTGAGATGGAGT  1850

Query    8  CTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAG  81
            |||.|||||||.||||||||||||||||||||.|.|||||.||||||.|||||||||.||||||||||||||||
Sbjct 1851  CTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGAGCGATCTCGGCTCATTGCAACCTCCGCCTCCTGGGTTCAAG  1924

Query   82  CAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCAT  155
            |.||||||...|||||||||||||.|||||||||||..|||..||||||||||||.||..|.|||||||||.||
Sbjct 1925  CGATTCTCTTGCCTCAGCCTCCCAGGTAGCTGGGATAGCAGGTGTGTGCCACCATGCCCAGCTAATTTTTGTAT  1998

Query  156  TTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------------------------  198
            |||||||.||||.||.||||||.|||||||.|||||.||||||                               
Sbjct 1999  TTTTAGTAGAGATGGGGTTTCATCATGTTGCCCAGGCTGGTCTCAAATTCCTGACCTCAGGTGATCTGCCCTCA  2072

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2073  GCCTCCCAAAGTGCTGGGATTACAGGCTTCAGCCACCACACCCAGCCTCATTCATACATTTCTTATTGTTGTTG  2146

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2147  TTTGAGACAGGGTCTTTCTCTGTCACCCAGGATGGAGTGCAGTGTTGTGATCATGCCTCAGTGCAGCGATCATG  2220

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2221  GCTCAGTGCAGCCTCAAACTCTTGGGCTCAAGCAGTGCTCCAACCTCAGCCTCCTGAGTAGCTAGGACTATAGG  2294

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2295  CACACAGCACCATGCCCCGGCTATTTTTTTATTTTGTAGAGATGGGGTCTCACTATGTTGCCCAGGCTAGTATT  2368

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2369  GAACTCCTGGCCTCAAGCAATCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTAAAGGCGTGAGCCACCGTAC  2442

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2443  CTTGCCCTTGGTGGAATCTTTAGGGTTTTCTATTCATACATATAAAATCATATCATTGGCAAACAGAGATAATT  2516

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2517  TTACTTCCTCCTTTCCAATTTGGATGCCTTAGATTTCTTTTCCTTGCCTAACTGCTCTGTCTAGAACTCCCAGC  2590

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2591  ACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTT  2664

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2665  ACCATTGAGGATGATGTTTGCTGTTAGTTTTTCATAAATGATCTATATCAGGCTGAATAAATTTCTATTTCTAA  2738

Query  199  -----  198
                 
Sbjct 2739  AAAAA  2743

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