Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11616
Subject:
NR_153323.1
Aligned Length:
3619
Identities:
172
Gaps:
3421

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCTTGGCGGGCGGTGAGGCGTGGGGTGACGGGGGGATGGCGGGGGCCGGCATGCGCGCGCATGCGCCGTGGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGCCGGTACCTCGGGCAAGATGGCTATCAAGAGTATCGCTTCCCGCCTCCGGGGTTCCCGTCGTTTTCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGCTTCGTGGCTGGGGCTGTAGTGGGCGCTGCGGGAGCTGGGCTCGCGGCCCTGCAGTTCTTCCGGAGTCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGCTGAGGGAGCGTTGACAGGGAAGCAGCCGGATGGATCTGCAGAAAAGGCTGTCTTGGAACAATTTGGATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCTTTAACTGGAACAGAGGCAAGGTGTTACACTAATCACGCTTTGTCTTATGATCAGGCAAAGCGGGTGCCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GATGGGTTCTTGAACATATTTCCAAAAGCAAGATAATGGGTGATGCAGACAGAAAGCATTGTAAATTTAAGCCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATCCCAATATCCCTCCAACCTTCAGTGCCTTCAATGAAGATTATGTTGGAAGTGGGTGGTCACGAGGACACAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCTCCAGCAGGAAATAACAAATTTTCAAGTAAAGCCATGGCTGAAACCTTTTACCTTTCTAACATTGTGCCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGATTTTGATAATAATTCTGGATATTGGAACAGAATAGAAATGTACTGTCGAGAGCTGACAGAAAGGTTTGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATGTTTGGGTGGTATCTGGGCCTTTGACCTTACCTCAGACTAGAGGCGATGGAAAGAAAATAGTTAGTTACCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAGCTGGGAGTACCCAAGCCTGCAGTTTTGACCTTTGAATGTTTGGAGCACCAGAAGTTCTGATTATGAGATGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGAGAAAATGACAGCTTTTCTTGTCTATTAAAAAACCAGGACTCACTCATGGCATTCCTTTGTCCTTTGTCCTA  888

Query    1  -----------------------------------------------------------------ATGGAGTCT  9
                                                                             .||||||||
Sbjct  889  CAAACAGAACAGAGACTGTGACCCCTGATCTTTGGGTTGGCATTATTTTATTTTTATTTTTTGAGGTGGAGTCT  962

Query   10  CACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCA  83
            ..|||||||..|||||||||||||||||||.|..||||.|||||||||||.|||||||||||||||||||||||
Sbjct  963  TGCTCTGTCGGCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCACCCTCTGCCTCCTGGGTTCAAGCA  1036

Query   84  ATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCA---  154
            |||||.|..|.||||||||||||||||||||||||||||.||..||||||||.|||..|.|||||||||.|   
Sbjct 1037  ATTCTTCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCACCACACCCAGCTAATTTTTGTATTT  1110

Query  155  -TTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-----------------------------  198
             ||||||||.||||.||.||||||||||||||||||||.||||||                             
Sbjct 1111  TTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCCG  1184

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1185  CCTTGGCGTCCCAAAGTGCTGGGATTACAGGTGATTGGCGAGGACAACGTGGCAGTCCCCTCACACCTTTATAA  1258

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1259  GGTAATCCTGGCCCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGGCCTTTGTGGTACCCAATGAAG  1332

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1333  CCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAAGTGAGCCTCCAGGACCTAGAGAAGTTGTCAGGACTGGTG  1406

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1407  TTTTTTCCTCATTTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGACACCTGTAAGCTCCTGGATTT  1480

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1481  CCAGGAGTTCACCTTGTACTTGAGTACAAGAAAGATTGAAGGAGCCCGATCAGTGCTCAGACTGGAAAAGATCA  1554

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1555  TGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATTACTTTATGAGTCGCTATGAGAAGAAGCTAGAAGAA  1628

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1629  CTCAAAGCTAAGGAGCAGTCAGGAACCCAGATAAGAAAGCCATCCTAGTTTTTATCTCAAGATGTGTCATACCG  1702

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1703  TCTGTAATGAAGCAGGCATGCCCTCTTTAGGCTAACATATTTTAGTGGCTTTGCTTTTTGCTTTTTAAAAAGTT  1776

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1777  TTTCTCTTTAAGAGATGTGGTCTCGCCGTGTCATCCAGGCTGGAGTGCAGTGGTGGAATCATAGCTCACTATAG  1850

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1851  CCTCAAACTTCTGGGCTTAAGCAATCCTCCTGCCTCTGCCCCCTGAGCAGCTGGGACTACAGGCACACACCATC  1924

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1925  ACCCTCAGCTACTAGTGGCTTTGCTTTAAAGAAACAGTGGAATCCTAAATTTATGACTAAAAATTCCCCCAAAA  1998

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1999  GATGAAAGATCTACAATGTTTTTGTCAGTATTATATTTGACTCAGGAACTAATTATTAAGGGAGCTTTGACACC  2072

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2073  TGCAGATGGAGGGCTGATCTTGTGTCAAGTTAACAGGAAGACTGCCCACAGATGACACTGCATTTGTATCCCTG  2146

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2147  TGGATGTAGAGTATTGGGAAGGCATTTGTTTAGTTTCATGCCTCCAAACCATGCATTGTCTGTGATGTATCTGC  2220

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2221  CCAGCCTTCTCAGAACTCAATGTTGTACATTTTTCCCTCTAGGACCTGAATTGGTCTTGGAGGCAGCTTTTAGA  2294

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2295  AATCCTCTGTGTAGTTCCTGTCCACATGCACTATATATTTGTTTCTTTTTTCTCCTCTCATGAATCTGCTCGTT  2368

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2369  TCTCTACTTCTGTCTACGTAGAAGCACTCAGCAACTAGTTTCTGCTCATTAAATGTGTTCTATATACTAGGCTC  2442

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2443  AGTGCTTTACATGTGTTGTCTCACAATGACTCTCTGAGGTAAATACACTATCCCCATTTTACCTGTGAGAAAAT  2516

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2517  TGAGGCTTAGAGAGCTTAGTGTCTTACCTGAGTTTCACTTTTCCAAAGTAGTCATCCACAAAGTATGAGGCAGA  2590

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2591  CAGATCTAAGAGAAGAAAGACAGCTGAGGTAGATTCAAATCTTTTCTGACATGGATGGTGGCTTTTTACTCAGA  2664

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2665  AATATATACCTATTTCCATGGGTATTTGTGGGCCTGAGGCATGCTTGGCAAGAAGAGTCTGGTTTCTCGTCTGC  2738

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2739  TATGCAAGCCAAAGGGACTTTAATGTTCTTTGAATTGAACCCTCCTTAGCTCTGTGGAAAGAGACAGTCAGGAA  2812

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2813  TATTTGGGAATTAGACGGCAATACTTTGTGGGGTTTATTAGAGCCCATGCTTGCCTCCAGAGATACAGTTCTTT  2886

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2887  TAGTGACCAGATACTGCCAAATTGATGTGTTCTTGCTTTCCAGGTGAGCTTTTTGTTCTTAAGATTAAGAAACC  2960

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2961  TATGAAGGATCTGCAGCCAGGCATGGTGGCTCAGGCCTATAATCTCAGCACTTTGGGAAATCGAGGTGGGTGGA  3034

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3035  TCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAAACCCTATCTTTACAAAAAAATACAAAAA  3108

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3109  TTAGCTGGGCGTGGTGGTGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAAATGGGAGGATTGCTTGAGCCT  3182

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3183  GGCAGGTCAAGGCTGCGATGGGACATGGTCATGCCACTGGACGCCAGCCTGGGCCACAGAGGGAGACCCTGTCT  3256

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3257  CAAAAAAAGAAAAGAAAAAAGAAAAAGGTCTGCCCACAAAATCACTAGCTTATTATTTGCTTCCTGTGTGCCTG  3330

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3331  CTTGTCTACCTAGCATAGTAGGCCAAAGGTCCAAAGGCATTTAGCATTCCTAGGGGAAATTGTGGCTGTTTTTC  3404

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3405  TGAGCCAGATCTCTTGATTTGGGTTTACACGGAGTCCTTTCATGGACTATCCTGAGTATTGTCAGTAAAACGTC  3478

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3479  TTGGGGCATAAGAACTTGTCTGAATCTGTCATACATACCACTGCTGTCTTTTCCGAGTGGTATTACAAGAAAGA  3552

Query  199  -------------------------------------------------------------------  198
                                                                               
Sbjct 3553  TTTTTGTGGTGTGTTTGTTCTAAGAGAAATGCCAAGGCTTTCAGATAAAGATAAGATGATAATGATT  3619

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