Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11616
Subject:
NR_161183.1
Aligned Length:
3175
Identities:
172
Gaps:
2977

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCAGAGCTCAACGTTCCCTAAGTGAGTGGCCTTTGACAGCAGTGCCAGGCAGCCCAGTGGGTGCAGGGCACACC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAGATGGAGGAAGGGCCAGGCATGCTTCCCAGACAGCCTCTGCCAGTCCAGGCAGGGGCTCCAGGGTGGCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGAAGGCAGCTTAGGCGGTGCCCGGCCCAAGGACTTGCTGTGCTCAGATCCTCCATTCAAGAGAGCTACAGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACGGGGGTGCTGGTGAGCAGGAGCCGAGACCATCTGGGGTGGGACCGACCAAGAGTTTGAGGTGTCCAGGGGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GACGTGAAGATGACCTATTGCAGAGGGTCCCTTCTCATTCACGCTCTGAAGTCTGCACAGGGGCAGGGGCTACC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGCTCCATTTCAGTTTGGCCTCTGTTGTATCAGCCAGAGGCCAGCAGAACTCTATGGTCACTCCCCCGTGTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGACAATTTGCCACCTCCACCGGCAGCCCAGGGCTCTGCCTGAATATTCTCGCCTGATCGTAGGATTGTGGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGGATATTCTCATTGATCTCTAAGGAAAATATTGTTCGCTTTTTAAAAACATGATCTGGTACCATTTCATTGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTTTAAGGAAGAAAAATCACATGGTTGTCATGAGCATGTACCGACAGAGCTAGGAGGGCCAGCTGTTCCGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTTGCCCAGGGCTGTCTTGTTTTTAAAATGGAAAGTTCGATGTCCTGGAAAACCCCTCAGTCCTGGGCAAACCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGTCACGCTGGATAGAAGGAGTTAGACATTCATATGATGTGCCGATGTCTTGCCAGTTGTAGAGTTTTGTGTAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACCTGTGTGTGGCCTGCGTGTCCACATGGGTGTGTAGGATGGCACCTACACACATACCTGAGGTCACCTCTTGG  888

Query    1  ------------------------------------------------------ATGGAGTCTCACTCTGTCAC  20
                                                                  |||||.||||||||||||||
Sbjct  889  TCCAGTGAGCCAGAATCCTGGGACTTCATCATCTTTTTTTTTTTTTTTTTTGAGATGGAATCTCACTCTGTCAC  962

Query   21  CCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACC  94
            |||||||||||.|||||||||..|||||||||||||||||||||.|||||..|||.||||||||||||||..||
Sbjct  963  CCAGGCTGGAGGGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCTGGGGCTCAAGCAATTCTCCTGCC  1036

Query   95  TCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCA-TTTTTAGTGGAGA  167
            ||||||||||.||||||||||||||.||.||||||||||||..||..|.|.|||||||.| ||||||||.||||
Sbjct 1037  TCAGCCTCCCGAGTAGCTGGGATTATAGGCGTGTGCCACCACGCCCTGCTGATTTTTGTATTTTTTAGTAGAGA  1110

Query  168  GGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------------------------------------  198
            .||.|||||||.||.|||||||||.||||||                                           
Sbjct 1111  TGGTGTTTCACTATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCTGCCTTGGCCTCCCGA  1184

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1185  AATGCTGGGGTTACAGGCATGAGCTACCATGCCCGGCCTCAGAATCCTGGGACTTCTGCTGGAGCCAGGGGTCA  1258

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1259  GAACAGACTCCTCTACTGGGACTGCCTGGCAGGGAGGACAGACGCTCAAGGCGGCCCCATGAGAACACAGCCAC  1332

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1333  CTGGAAAAATGGTGGAAGGGAAGATTCTGCCAACCTCCTCCGACTCCCTATCTCAGTTACACTGGTCCATAATT  1406

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1407  TCTTTTCTTTTTCTTAAGTCTGTTTCATTGGTTTCTGTTCCTGGAAAATGGACACAATTCTGATGAATTCATGT  1480

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1481  ATTCTGCATCCACGTGTCAGCATCTCCAGCCTTGTGACGCAGTGCCTGGCTCAGAACAGGCAATCAGGCCATGG  1554

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1555  CATCTGAATGAATGAGAGGGTGTGCCCTGGCCGTATCTCAGGCAGCAGATGCATTCAGCTGCAGGTAACAGACA  1628

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1629  CGTAGACAAACAGTGGCTTAAAAAAGAGAGGCTTTAAAAGTATTTTGTTTTTCTTTCTTCACGTAGCAAGAAGT  1702

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1703  CTGGCATTTGGCATTCCCAGGCTGTGGCGTGACAGCTTTGTGAAGTTATCAGGGTCTCAGACCCTGACATATTT  1776

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1777  CTGCTCTGCTACCCTCAGCATGTAGATTTGATCTTCACGGCTACAAGAAACCTGCTGCTACTGCAGGCATCTTA  1850

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1851  CACGAGTTCCAGGCAGGAAGAGAAAGGAAAGGGTGACAGAGACAGAAAGCAATGTCCCCAGATACCCTTAGTTT  1924

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1925  TCCATCTCATAAGCCAGAATGATGTCACGTGGCATCCCTGGATGCACAGGAGGCTGAGAGATAGTGGCGTTTGT  1998

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1999  TAGCTGGTCTCCTAGCCATCCTGAATGCCAAGTTTGTTATAAAGAAACAGAGGCAAAATGGCGATCAGGCAGGC  2072

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2073  AACTGGGTGGTCTCTGCCACGGGCCCCTTGGCCATTCTTTGTAATGATGGTCTTTGTCTTGGACCCTATTTTGG  2146

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2147  ATATTTGGGCACCTTTGTGGTACCCTTATGTGCTGGTTTTGCTGTTGTCTGCCCTTCAGGAATAGCAGCTGAGT  2220

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2221  CAAGCTGTCCTTGGCTGCTCCAATCTGGAGTCAGAGGTTGGAGATTTCCATGGCTCCCCATGGCTCCTTGGGGC  2294

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2295  CTCCTAAGAAAATGTTTTAATAAGGAAGTCCAAGGCTGAGACAGACATGCTCCTTCTTAGAGACACATGGGAAC  2368

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2369  ATGCCTCTGCTCACAGCTGGTAGCCACAGATGTAAACCGTAGCCCATGGAACGGAGACAGTGAAGAATTGATGG  2442

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2443  ATAAATGAATAATGATGATGGACAGCAGATGTATAAAAGGCATAAAAGGATAGTGTTAGGGCTGGAATGTCTTC  2516

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2517  CCCCCAATTCATATGTTGAACCTTTAATGCCTAATACTTCAGAAAGAGACTGTGTTTGAAGATATGGTCTTTAC  2590

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2591  AGAGGGAATAAAGTTAAAATAAGGTCATTAGGGTGAGCCCTAATCCAAAGGATGGGTGTCCTAATCAGAGGAGG  2664

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2665  AGATTAGGACCCAGACACACACACACACACAGAGCCAGGTGAGGACACAGGGAGAAAATGGCCACGTACAAGCC  2738

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2739  AAGATGAGAGGACTCAGGAAGAACCAGCCGACTCCACCCTTCAAAACTGTGAGAACATAGATGTCTGCTGTTTG  2812

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2813  AGCCACCCTGTCTGCAAGCAGTCAGCAAGCATTCATTGAGTGCTTGCAGTATTCAAGGCACCACAGATACAATG  2886

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2887  TTGAATAAGGCAAAGCACCTGCCCTCAGGTAGCTTGCAGTCAGGGAGGTAAGGGTAGTGGGCAGAGAGACCTGG  2960

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2961  AAACAGATATTAGACCTGCACTAAGCATGTGTGGTTATTGAACAGTAAAAATGCCACCACAAATTGCGATATGA  3034

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3035  TGTAAGTAAAATGCGTACTGGCTATTGAAGACTTGGCACAGAAAAATAATGTAAAATCTCATTAGTAATGGTTT  3108

Query  199  -------------------------------------------------------------------  198
                                                                               
Sbjct 3109  TATATTGATTACGCATTGAAATAATACTATTTTGGACAGATTGGGTTAAATAAAATATTAAATTTGA  3175

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