Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
NM_029709.2
Aligned Length:
4380
Identities:
402
Gaps:
3933

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAACCGAGAATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAAGCGGCTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTCGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTGGGAGATGCTAAAGACTCCGTGAGGGAGCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGTGAACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAATGTCATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAAAAGTCTGGAAATATGATACAGTCTGCAAATGAAAAAAATTTTGATGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATGTTAACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGGACCACCCGTAGGCTCATGTCATCCAGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGCGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGATGAAGAGGATTTTATTAAAGCCTTTGATGATGTACCTGTAGTGCAGATTTACTCCAGCCGAGACCTCGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATCAGAGAAATCCTGTCAGATGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGCTTGTATCACATTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGAAATAAGTTTGATCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATCCCGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCGGCACACTCACATCCCTCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCGTCAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATATCAGTATTAGCTGAAACAATAAAGAAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGGTCGGATCCGCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTTGCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGTA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCCGAGAAACAAGTCCTAACCGGATTGGATTAGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTGAACGCCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CGCCAGGAGCAAGAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATGGAATGTACTCTGATGATGATGCCAACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGTAGAATTGAAGAGACTGTGTGAGATTTTCACCC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAGACCCTCGTGGATTTTATAATCATT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CATAAGGATGACTTGCAAGACTGGCTCTTCGTCCTTCTCACACAACTACTTAAGAAAATGGGAGCAGACTTACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGTCACCAGGGATTCCTTTCCATTTGATCAACAATTTA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ACATTTTGATGAGATTTATTGTGGATCAGACTCAAACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAAATAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAATTCCAGCGAAACAAGACTAGCTGTTTCTAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCTCTGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTGAACTGAACACGCCTGAATTTACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CTCCTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGACTATCTCCAA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAATCTACAGCTCTTTGCGTGGAGTTACAGAAGCC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ATTGAAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGGGAGGTAGTGAGATAGAAGGAGGCA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAATATAACCCGTATCCCTACTCCGACACCATCAACACCTATGACAAGACGGCTCTGAAGGAAGCAGTGTTTGA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGACAGC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTGCTGCTGGAAACTCTCGGAGACAAAGACCATTC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTATGCAG  3922

Query    1  -----------ATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCT  63
                       ||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||
Sbjct 3923  AACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAGAGCGGCCGAGGAAGCT  3996

Query   64  GCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGA  137
            ||.|||||.||.|||||.||.||||||||.||||||||||||||.|||||.||.||.|||||||||||.|||||
Sbjct 3997  GCATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAATCATCCAGACAGCCGA  4070

Query  138  CTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC  211
            |||||||||||||||.|||||.||||||||||||||.||.||.||.|||||||||.|.||||||||.|||||||
Sbjct 4071  CTACCCCATCAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGC  4144

Query  212  AGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGC  285
            |||||||.||||||||||||||.|||.|||||||||||||.|||||||||||.||.|||||.||.||.|||||.
Sbjct 4145  AGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACGACAACACCGAGAGCAGTGTACGGAAAGCCAGT  4218

Query  286  GTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAG  359
            ||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct 4219  GTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGATCTGAAACCTCACCTCGCACAGCTCACGGGGAG  4292

Query  360  CAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG  433
            ||||||||||||.||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.||||
Sbjct 4293  CAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTCTTCCTCTGATG  4366

Query  434  TCTCCACGCACAGC  447
            |.|||||.||||||
Sbjct 4367  TGTCCACACACAGC  4380

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