Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_011248108.1
Aligned Length:
4404
Identities:
402
Gaps:
3957

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAACCGAGAATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAAGCGGCTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTCGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTGGGAGATGCTAAAGACTCCGTGAGGGAGCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGTGAACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAATGTCATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAAAAGTCTGGAAATATGATACAGTCTGCAAATGAAAAAAATTTTGATGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATGTTAACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGGACCACCCGTAGGCTCATGTCATCCAGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGCGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGATGAAGAGGATTTTATTAAAGCCTTTGATGATGTACCTGTAGTGCAGATTTACTCCAGCCGAGACCTCGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATCAGAGAAATCCTGTCAGATGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGCTTGTATCACATTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGAAATAAGTTTGATCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATCCCGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCGGCACACTCACATCCCTCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCGTCAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATATCAGTATTAGCTGAAACAATAAAGAAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGAGTCCAGACACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGGGAAGACTTGGAGTACGTAGGCCTGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGAAACAAGTCCTAACCGGATT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGATTAGATCGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTCTTGAGTAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CAGCACTGACCTGGAAGCAGCAGTGGCTGACGCTCTGAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATGGAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAATGGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTGGTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGTAGAATTGA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTCAGTATGTTTTTGGAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACCCTCGTGGATTTTATAATCATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTCCTTCTCACACAACTACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TAAGAAAATGGGAGCAGACTTACTTGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGTCACCAGGGATT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAGACTCAAACTCCAAACCTCAAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GTCAAAGTAGCAATCCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAATTCCAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CGAAACAAGACTAGCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTGAGAAAGGCAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CACAAATTGTGCTCATCTCTCTGTTTGAACTGAACACGCCTGAATTTACCATGTTACTTGGTGCCTTGCCAAAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  ACATTCCAGGATGGTGCCACCAAACTCCTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAATCTACAGC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TCTTTGCGTGGAGTTACAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GAGGTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GCCTTTCCGGGGCCAAGAGCACGGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCTATGACAAGAC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GGCTCTGAAGGAAGCAGTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTCAAGATCACCAGGGAGGACAGCCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTGCTGCTGGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AACTCTCGGAGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAGAAACCAGC  3922

Query    1  -----------------------------------ATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAG  39
                                               ||||||||||||||||||||||||||||||||.||||||
Sbjct 3923  CAGCAAGATTCAAAAACTATGCAGAACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAG  3996

Query   40  GTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT  113
            ||||||||||||||.|||||.|||||.|||||.||.|||||.||.||||||||.||||||||||||||.|||||
Sbjct 3997  GTGGTGAGAGCGGCCGAGGAAGCTGCATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCATCAAAGTGCT  4070

Query  114  CTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGA  187
            .||.||.|||||||||||.||||||||||||||||||||.|||||.||||||||||||||.||.||.||.||||
Sbjct 4071  GTGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGA  4144

Query  188  GGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACC  261
            |||||.|.||||||||.||||||||||||||.||||||||||||||.|||.|||||||||||||.|||||||||
Sbjct 4145  GGATCACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACGACAACACC  4218

Query  262  GAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACC  335
            ||.||.|||||.||.||.|||||.||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 4219  GAGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGATCTGAAACC  4292

Query  336  TCACCTTGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAGACCACCAACA  409
            ||||||.|||||||||||.|||||||||||||||||.||.||||||||.|||||||||||||||||.|||||||
Sbjct 4293  TCACCTCGCACAGCTCACGGGGAGCAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGACTACCAACA  4366

Query  410  GCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  447
            |||||||||||||.|||||.|||||.|||||.||||||
Sbjct 4367  GCAACAGCAGCTCTTCCTCTGATGTGTCCACACACAGC  4404

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