Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017003659.1
Aligned Length:
4673
Identities:
414
Gaps:
4237

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAACTGATAGACTATTTCTCAGACAAACAGAAGTCTGCTGACCTTGAGCATGACCAGACCATGTTAGATAAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTTGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTGCTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTAGGAGATGCTAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTACGTATGGGACAGAATGCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCGAGAAGGCATCTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATAGCAACACTCAATGCCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGGAAATTTACAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGAGAACGTGTGAGGGCAGATCTCAGTAAAAAAGGATTGCCACAGTCCCGGTTGAATGTAATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAGAAATCTGGAAACATGATACAATCTGCAAATGATAAAAATTTCGACGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTTGATGAAGAGGATTTTATTAAAGCATTTGATGATGTACCTGTAGTACAGATTTATTCCAGCCGAGACCTTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATTAGGGAAATATTATCTGATGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCTTTACTTTTGGCTGGTGCTGCTGAGTATGATAACTTCTTTCAACATTTGCGTCTTTTGGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGAGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGGAATAAGTTTGACCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATTCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCCACATCTGGTGTTGTAGCTGTTAGGTTAATTATTCGGCACACACACATCCCTAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTAATACCTGTCATAACAAGCAACTGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAACGACACATATCAGTATTAGCTGAAACAATAAAGAAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTCCTACCAGAAAGCCCTGCAGTCCCACCTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGACAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCGTCCGCTGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGCCAAAAGAAGTCCTACTGGAAGTACCACATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGGTCCCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGGTCATACGCATCCTTAGAGTCCAGACACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGGGAAGACATGGAGTACATAGGCCTGGACTCAGATGGTACTACCACTAAAGCGGAGGGTCGGATCCGCACA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCGCGCTAAAGT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGTTTCACAGTCCCAGCGATCCAGATCTGCTAATCCTGCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAAT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGTTGGGAAGTGGTTATGGTGGACTTACTGGGGGCTCCTCACGAGGCCCACCTGTGACACCGTCTTCAGAAAAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGCACGGAGCAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTGCTCGGGGCTTTCCTCCACTTGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTGATGCTTTGAAGAAGCCTGTGAGGAGGAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ATATGAGCCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCACTGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GCTAGTTCAAACTGGTCAGAAAGGAAAGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GAGTCGAGTTGAACTGAAAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TCAGTATGTTTTTGGAGACTCTTGTGGATTTTATAATAATTCATAAGGATGATTTACAAGACTGGCTTTTTGTT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CTTCTCACACAATTACTTAAGAAAATGGGAGCAGATTTACTTGGATCTGTGCAAGCAAAAGTTCAAAAGGCTCT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGATGTCACAAGGGACTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAAACTC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AAACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAAATACATTGAGTCTCTGGCCAGACAGATGGATCCAACA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GATTTTGTAAACTCTAGTGAGACAAGGCTTGCTGTTTCTAGAATCATAACCTGGACAACAGAACCAAAGAGTTC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGACGTGAGAAAGGCAGCACAGATTGTGCTAATCTCTCTGTTTGAATTGAATACTCCTGAATTTACCATGTTAC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAAC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ACCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATGATACAGAGAACCTGAACT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CTGAAGAAATCTATAGTTCTCTACGTGGAGTTACAGAAGCCATTGAAAAGTTTAGTTTTCGAAGCCAAGAAGAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTGAATGAGCCAATTAAACGAGATGGCAAAAAGGAGTGTGATATTGTGTCCCGCGATGGGGGCGCTGCCTCCCC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TGCCACTGAGGGCCGGGGGGGTAGTGAAGTAGAAGGAGGCCGGACAGCTCTGGATAACAAGACCTCACTACTCA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AACACCTACGACAAGACCGCCCTGAAAGAGGCTGTGTTCGATGACGACATGGAGCAGCTTCGAGACGTGCCCAT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CGACCATTCTGACCTGGTGGCTGACCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGAACGGAAGG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  GAGCCCTGCTGGAGCTGCTCAAGATCACGCGGGAAGACAGCCTTGGTGTCTGGGAGGAGCACTTCAAGACCATT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CTGCTCCTGCTGCTGGAGACCCTTGGAGACAAAGACCATTCAATTCGAGCACTGGCGTTAAGAGTTTTGAGGGA  4070

Query    1  ----------------------------------------------------ATGAAGACTCTGGAAGCCCACA  22
                                                                ||||||||||||||||||||||
Sbjct 4071  AATTCTGAGAAATCAACCAGCAAGATTTAAAAACTACGCCGAGCTGACGATTATGAAGACTCTGGAAGCCCACA  4144

Query   23  AAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAG  96
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  AAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAG  4218

Query   97  CAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCA  170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  CAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCA  4292

Query  171  GACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC  244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293  GACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC  4366

Query  245  AGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATC  318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367  AGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATC  4440

Query  319  GGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAG--ATGAA----GCTA-CTAAACTTATACA  385
            |||||||||||||||||||||||||||||||||||||||||||||  |||.|    |.|| ||...||.||||.
Sbjct 4441  GGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGGTATGTATAGTGTTACCTGGGCTGATACG  4514

Query  386  TA-AAGAGGGCCCAGACCACC-------AACAGCA----ACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  447
            .| |...||||.|.| |||.|       ||...||    ||.|||||||     ..|||   ||||  .||||.
Sbjct 4515  CACACCTGGGCTCTG-CCAGCTTGTCATAAATCCATTTGACTGCAGCTC-----TGGAT---TCCA--GACAGG  4577

Query  448  --------------------------------------------------------------------------  447
                                                                                      
Sbjct 4578  TTTTGTTCATTGTGTTTTAGCTGGGCCTTATTTCTCCAAGAGGATTTTTCTAAATATAAAAATGAACTATACAG  4651

Query  448  -----------  447
                       
Sbjct 4652  TGAAATCAGTT  4662

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