Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017003661.1
Aligned Length:
4649
Identities:
414
Gaps:
4213

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAACTGATAGACTATTTCTCAGACAAACAGAAGTCTGCTGACCTTGAGCATGACCAGACCATGTTAGATAAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTTGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTGCTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTAGGAGATGCTAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTACGTATGGGACAGAATGCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCGAGAAGGCATCTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATAGCAACACTCAATGCCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGGAAATTTACAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGAGAACGTGTGAGGGCAGATCTCAGTAAAAAAGGATTGCCACAGTCCCGGTTGAATGTAATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAGAAATCTGGAAACATGATACAATCTGCAAATGATAAAAATTTCGACGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTTGATGAAGAGGATTTTATTAAAGCATTTGATGATGTACCTGTAGTACAGATTTATTCCAGCCGAGACCTTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATTAGGGAAATATTATCTGATGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCTTTACTTTTGGCTGGTGCTGCTGAGTATGATAACTTCTTTCAACATTTGCGTCTTTTGGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGAGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGGAATAAGTTTGACCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATTCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCCACATCTGGTGTTGTAGCTGTTAGGTTAATTATTCGGCACACACACATCCCTAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTAATACCTGTCATAACAAGCAACTGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAACGACACATATCAGTATTAGCTGAAACAATAAAGAAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTCCTACCAGAAAGCCCTGCAGTCCCACCTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGACAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCGTCCGCTGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGCCAAAAGAAGTCCTACTGGAAGTACCACATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGGTCCCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGGTCATACGCATCCTTAGATGGTACTACCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTAAAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AACCGGGGCCGCAGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGCTAATCCTGCTGGTGCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGCCGGTCAAGTTCCCCAGGAAAATTGTTGGGAAGTGGTTATGGTGGACTTACTGGGGGCTCCTCACGAGGCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AACCGAATAGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCACTTGATCGGTTTGGGCTTGGCCAGCCAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GCTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGAGGAGGAGATATGAGCCGTATGGGATGTATTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCCATTATCTGCGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTCAAACTGGTCAGAAAGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AAAGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGTTGAACTGAAAAGGTT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTGTGAGATCTTCACTCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGACTCTTG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGGATTTTATAATAATTCATAAGGATGATTTACAAGACTGGCTTTTTGTTCTTCTCACACAATTACTTAAGAAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATGGGAGCAGATTTACTTGGATCTGTGCAAGCAAAAGTTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTCC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAAACTCAAACTCCAAACCTCAAGGTCAAAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTGCAATCCTGAAATACATTGAGTCTCTGGCCAGACAGATGGATCCAACAGATTTTGTAAACTCTAGTGAGACA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AGGCTTGCTGTTTCTAGAATCATAACCTGGACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCAGCACAGAT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGTGCTAATCTCTCTGTTTGAATTGAATACTCCTGAATTTACCATGTTACTTGGTGCCTTGCCAAAAACATTCC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAACACCAGTGTGGGCTCTCCAAGCAAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGGGGGTCTGTCTCCAAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAATCTATAGTTCTCTAC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GTGGAGTTACAGAAGCCATTGAAAAGTTTAGTTTTCGAAGCCAAGAAGATCTGAATGAGCCAATTAAACGAGAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GGCAAAAAGGAGTGTGATATTGTGTCCCGCGATGGGGGCGCTGCCTCCCCTGCCACTGAGGGCCGGGGGGGTAG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TGAAGTAGAAGGAGGCCGGACAGCTCTGGATAACAAGACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CGGGGCCGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCTACGACAAGACCGCCCTG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AAAGAGGCTGTGTTCGATGACGACATGGAGCAGCTTCGAGACGTGCCCATCGACCATTCTGACCTGGTGGCTGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGAACGGAAGGGAGCCCTGCTGGAGCTGCTCAAGA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TCACGCGGGAAGACAGCCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCTGCTGCTGGAGACCCTT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GGAGACAAAGACCATTCAATTCGAGCACTGGCGTTAAGAGTTTTGAGGGAAATTCTGAGAAATCAACCAGCAAG  4070

Query    1  ----------------------------ATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071  ATTTAAAAACTACGCCGAGCTGACGATTATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGA  4144

Query   47  GAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  GAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCC  4218

Query  121  ATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGC  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  ATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGC  4292

Query  195  AAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTA  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293  AAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTA  4366

Query  269  GTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTT  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367  GTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTT  4440

Query  343  GCACAGCTCACAGGGAGCAAG--ATGAA----GCTA-CTAAACTTATACATA-AAGAGGGCCCAGACCACC---  405
            |||||||||||||||||||||  |||.|    |.|| ||...||.||||..| |...||||.|.| |||.|   
Sbjct 4441  GCACAGCTCACAGGGAGCAAGGTATGTATAGTGTTACCTGGGCTGATACGCACACCTGGGCTCTG-CCAGCTTG  4513

Query  406  ----AACAGCA----ACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC------------------------  447
                ||...||    ||.|||||||     ..|||   ||||  .||||.                        
Sbjct 4514  TCATAAATCCATTTGACTGCAGCTC-----TGGAT---TCCA--GACAGGTTTTGTTCATTGTGTTTTAGCTGG  4577

Query  448  -------------------------------------------------------------  447
                                                                         
Sbjct 4578  GCCTTATTTCTCCAAGAGGATTTTTCTAAATATAAAAATGAACTATACAGTGAAATCAGTT  4638

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