Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017003668.1
Aligned Length:
4538
Identities:
414
Gaps:
4102

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAACTGATAGACTATTTCTCAGACAAACAGAAGTCTGCTGACCTTGAGCATGACCAGACCATGTTAGATAAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTTGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTGCTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTAGGAGATGCTAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTACGTATGGGACAGAATGCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCGAGAAGGCATCTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATAGCAACACTCAATGCCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGGAAATTTACAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGAGAACGTGTGAGGGCAGATCTCAGTAAAAAAGGATTGCCACAGTCCCGGTTGAATGTAATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAGAAATCTGGAAACATGATACAATCTGCAAATGATAAAAATTTCGACGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTTGATGAAGAGGATTTTATTAAAGCATTTGATGATGTACCTGTAGTACAGATTTATTCCAGCCGAGACCTTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATTAGGGAAATATTATCTGATGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCTTTACTTTTGGCTGGTGCTGCTGAGTATGATAACTTCTTTCAACATTTGCGTCTTTTGGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGAGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGGAATAAGTTTGACCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATTCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCCACATCTGGTGTTGTAGCTGTTAGGTTAATTATTCGGCACACACACATCCCTAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTAATACCTGTCATAACAAGCAACTGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAACGACACATATCAGTATTAGCTGAAACAATAAAGAAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTCCTACCAGAAAGCCCTGCAGTCCCACCTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGACAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCGTCCGCTGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGCCAAAAGAAGTCCTACTGGAAGTACCACATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGGTCCCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGGTCATACGCATCCTTAGAGTCCAGACACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGGGAAGACATGGAGTACATAGGCCTGGACTCAGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCAACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCGCGCTAAAGTGGTTTCACAGTCCCAGCCTGGCAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCGGTCAAGTTCCCCAGGAAAATTGTTGGGAAGTGGTTATGGTGGACTTACTGGGGGCTCCTCACGAGGCCCAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CGAATAGGATTAGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTGATGCTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTGTGAGGAGGAGATATGAGCCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAGGATGTAGCAGAAGT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCTCAACCACTGTGCTAGTTCAAACTGGTCAGAAAGGAAAGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GCCAAAGAACACTGAGTCGAGTTGAACTGAAAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTGACCCTCAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCAAGAGAGTTTTCAGTATGTTTTTGGAGACTCTTGTGGATTTTATAATAATTCATAAGGATGATTTACAAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTGGCTTTTTGTTCTTCTCACACAATTACTTAAGAAAATGGGAGCAGATTTACTTGGATCTGTGCAAGCAAAAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GTGGATCAAACTCAAACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAAATACATTGAGTCTCTGGCCAGACA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GATGGATCCAACAGATTTTGTAAACTCTAGTGAGACAAGGCTTGCTGTTTCTAGAATCATAACCTGGACAACAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AACCAAAGAGTTCAGACGTGAGAAAGGCAGCACAGATTGTGCTAATCTCTCTGTTTGAATTGAATACTCCTGAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTTACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GAATTCCAGTAACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATGATACA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAGAACCTGAACTCTGAAGAAATCTATAGTTCTCTACGTGGAGTTACAGAAGCCATTGAAAAGTTTAGTTTTCG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  AAGCCAAGAAGATCTGAATGAGCCAATTAAACGAGATGGCAAAAAGGAGTGTGATATTGTGTCCCGCGATGGGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCGCTGCCTCCCCTGCCACTGAGGGCCGGGGGGGTAGTGAAGTAGAAGGAGGCCGGACAGCTCTGGATAACAAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  ACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGGCGCGAGACTACAACCCGTACCCCTA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CTCAGATGCCATCAACACCTACGACAAGACCGCCCTGAAAGAGGCTGTGTTCGATGACGACATGGAGCAGCTTC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GAGACGTGCCCATCGACCATTCTGACCTGGTGGCTGACCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGTG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GAGGAACGGAAGGGAGCCCTGCTGGAGCTGCTCAAGATCACGCGGGAAGACAGCCTTGGTGTCTGGGAGGAGCA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTTCAAGACCATTCTGCTCCTGCTGCTGGAGACCCTTGGAGACAAAGACCATTCAATTCGAGCACTGGCGTTAA  3922

Query    1  -----------------------------------------------------------------ATGAAGACT  9
                                                                             |||||||||
Sbjct 3923  GAGTTTTGAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAAAAACTACGCCGAGCTGACGATTATGAAGACT  3996

Query   10  CTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTC  83
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997  CTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTC  4070

Query   84  CATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTG  157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071  CATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTG  4144

Query  158  CCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATC  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  CCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATC  4218

Query  232  CCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAAT  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  CCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAAT  4292

Query  306  TTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAG--ATGAA----GCTA-  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||.|    |.|| 
Sbjct 4293  TTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGGTATGTATAGTGTTAC  4366

Query  373  CTAAACTTATACATA-AAGAGGGCCCAGACCACC-------AACAGCA----ACAGCAGCTCCTCCTCCGATGT  434
            ||...||.||||..| |...||||.|.| |||.|       ||...||    ||.|||||||     ..|||  
Sbjct 4367  CTGGGCTGATACGCACACCTGGGCTCTG-CCAGCTTGTCATAAATCCATTTGACTGCAGCTC-----TGGAT--  4432

Query  435  CTCCACGCACAGC-------------------------------------------------------------  447
             ||||  .||||.                                                             
Sbjct 4433  -TCCA--GACAGGTTTTGTTCATTGTGTTTTAGCTGGGCCTTATTTCTCCAAGAGGATTTTTCTAAATATAAAA  4503

Query  448  ------------------------  447
                                    
Sbjct 4504  ATGAACTATACAGTGAAATCAGTT  4527

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