Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017003679.2
Aligned Length:
3822
Identities:
447
Gaps:
3375

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACTACTGGGAAAGATAAAAATTTCGACGATGAAGATTCTGTGGATGGTAACAGACCTTCCTCTGCTAGTTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTTCATCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTGCTGTTGATGAAGAGGATTTTATTAAAGCATTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GATGATGTACCTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGGAATCCATAAACAAAATTAGGGAAATATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCTGATGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCTAAAAAAGATTAGATCTTTACTTTTGGCTGGTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGCTGAGTATGATAACTTCTTTCAACATTTGCGTCTTTTGGATGGAGCCTTTAAACTCTCTGCTAAGGACCTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCTGGGGAATAAGTTTGACCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATTCCAAACAGTGCCAAAATTATGGCCACATCTGGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGTAGCTGTTAGGTTAATTATTCGGCACACACACATCCCTAGGTTAATACCTGTCATAACAAGCAACTGTACC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCTAAGTCTGTCGCAGTTAGAAGGCGCTGTTTTGAATTTTTAGATTTGCTTTTACAAGAATGGCAGACACATTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTAGAACGACACATATCAGTATTAGCTGAAACAATAAAGAAGGGAATACATGATGCTGATTCCGAAGCAAGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGAAGCCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGTCCTCCTACCAGAAAGCCCTGCAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTCAGTCAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCGTCCGCTGTCTGCCAAAAGAAGTCCTACTGGAAGTACCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGATATT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACGCCTTTCAGCTCTGCAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCTTTGCCTCCAGGGTCATACGCATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCCAGATCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCTAATCCTGCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAATTGTTGGGAAGTGGTTATGGTGGACTTAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGGGGCTCCTCACGAGGCCCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCACTTGATCG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTGAAGCTGCTGTTGCTGATGCTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGCCTGTGAGGAGGAGATATGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CAAACTGGTCAGAAAGGAAAGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GTTGAACTGAAAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTTCAGTAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTTTTTGGAGACTCTTGTGGATTTTATAATAATTCATAAGGATGATTTACAAGACTGGCTTTTTGTTCTTCTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CACAATTACTTAAGAAAATGGGAGCAGATTTACTTGGATCTGTGCAAGCAAAAGTTCAAAAGGCTCTAGATGTC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACAAGGGACTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAAACTCAAACTCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AAACCTCAAGGTCAAAGTTGCAATCCTGAAATACATTGAGTCTCTGGCCAGACAGATGGATCCAACAGATTTTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TAAACTCTAGTGAGACAAGGCTTGCTGTTTCTAGAATCATAACCTGGACAACAGAACCAAAGAGTTCAGACGTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AGAAAGGCAGCACAGATTGTGCTAATCTCTCTGTTTGAATTGAATACTCCTGAATTTACCATGTTACTTGGTGC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAACACCAGTG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGGGCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AATCTATAGTTCTCTACGTGGAGTTACAGAAGCCATTGAAAAGTTTAGTTTTCGAAGCCAAGAAGATCTGAATG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGCCAATTAAACGAGATGGCAAAAAGGAGTGTGATATTGTGTCCCGCGATGGGGGCGCTGCCTCCCCTGCCACT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GAGGGCCGGGGGGGTAGTGAAGTAGAAGGAGGCCGGACAGCTCTGGATAACAAGACCTCACTACTCAACACCCA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GCCTCCGCGCGCCTTCCCGGGGCCGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ACGACAAGACCGCCCTGAAAGAGGCTGTGTTCGATGACGACATGGAGCAGCTTCGAGACGTGCCCATCGACCAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TCTGACCTGGTGGCTGACCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGAACGGAAGGGAGCCCT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GCTGGAGCTGCTCAAGATCACGCGGGAAGACAGCCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TGCTGCTGGAGACCCTTGGAGACAAAGACCATTCAATTCGAGCACTGGCGTTAAGAGTTTTGAGGGAAATTCTG  3330

Query    1  ---------------------------------------------ATGAAGACTCTGGAAGCCCACAAAGACTC  29
                                                         |||||||||||||||||||||||||||||
Sbjct 3331  AGAAATCAACCAGCAAGATTTAAAAACTACGCCGAGCTGACGATTATGAAGACTCTGGAAGCCCACAAAGACTC  3404

Query   30  CCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCA  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405  CCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCA  3478

Query  104  TCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAA  177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479  TCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAA  3552

Query  178  GTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTA  251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  GTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTA  3626

Query  252  TGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAG  325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627  TGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAG  3700

Query  326  ACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAG  399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701  ACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAG  3774

Query  400  ACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  447
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775  ACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  3822

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