Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017312727.1
Aligned Length:
4782
Identities:
402
Gaps:
4335

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAACCGAGAATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAAGCGGCTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTCGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTGGGAGATGCTAAAGACTCCGTGAGGGAGCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGTGAACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAATGTCATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAAAAGTCTGGAAATATGATACAGTCTGCAAATGAAAAAAATTTTGATGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATGTTAACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGGACCACCCGTAGGCTCATGTCATCCAGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGCGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGATGAAGAGGATTTTATTAAAGCCTTTGATGATGTACCTGTAGTGCAGATTTACTCCAGCCGAGACCTCGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATCAGAGAAATCCTGTCAGATGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGCTTGTATCACATTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGAAATAAGTTTGATCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATCCCGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCGGCACACTCACATCCCTCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCGTCAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATATCAGTATTAGCTGAAACAATAAAGAAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGAGTCCAGACACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGGGAAGACTTGGAGTACGTAGGCCTGGATGCAGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAGCACC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGCGATC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGATCTGCTAACCCTGCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTTGCTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GGGGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGCCGAGAAACAAGTCCTAACCGGATTGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCTTCACACCACTCGATCGGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTCTTGAGTACCAGCACTGACCTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGAGAAGGAGATACGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCCCTATGGAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTCAGTA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGTTTTTGGAGACCCTCGTGGATTTTATAATCATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTCCTTCTC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ACACAACTACTTAAGAAAATGGGAGCAGACTTACTTGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CACCAGGGATTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAGACTCAAACTC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CAAACCTCAAGGTCAAAGTAGCAATCCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTAAATTCCAGCGAAACAAGACTAGCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GAGAAAGTCCCAGCGTCAGCGTAGTCGAGCAGGGGAGGATGTCCCTGGTAGGTCAGTTCCCACCTGCTCTGGGC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTGGAGAAGGAAGCTTGGAAGAAAGTTGTAAACAGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAACTGAAC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ACGCCTGAATTTACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCATAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CCACCTCAAGAACTCCAGTAACACCGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGTCGGTTGTGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GGTTGGAGTGCCGACGGGCTATCGAAGCCCCCACCTCCCTTTTCTCAGCCTAACTCCATTCCCACCGCTCCCTC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CCACAAGACTCTCAGGCGCTCTTACTCTCCCAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TCTACAGCTCTTTGCGTGGAGTTACAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATGAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  GGGCCGGGGAGGTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGC  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  CTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCTAT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GACAAGACGGCTCTGAAGGAAGCAGTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTC  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  AGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGC  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  TGGAGTTGCTCAAGATCACCAGGGAGGACAGCCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTG  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  CTGCTGGAAACTCTCGGAGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAG  4292

Query    1  -------------------------------------------ATGAAGACTCTGGAAGCCCACAAAGACTCCC  31
                                                       |||||||||||||||||||||||||||||||
Sbjct 4293  AAACCAGCCAGCAAGATTCAAAAACTATGCAGAACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCC  4366

Query   32  ATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATC  105
            |.||||||||||||||||||||.|||||.|||||.|||||.||.|||||.||.||||||||.||||||||||||
Sbjct 4367  ACAAGGAGGTGGTGAGAGCGGCCGAGGAAGCTGCATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCATC  4440

Query  106  AAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT  179
            ||.|||||.||.||.|||||||||||.||||||||||||||||||||.|||||.||||||||||||||.||.||
Sbjct 4441  AAAGTGCTGTGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATGCAGACAAAGGT  4514

Query  180  CGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATG  253
            .||.|||||||||.|.||||||||.||||||||||||||.||||||||||||||.|||.|||||||||||||.|
Sbjct 4515  GGTGGAGAGGATCACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACG  4588

Query  254  ACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGAC  327
            ||||||||||.||.|||||.||.||.|||||.||||||||||||||||||||.||||||||||||||||||||.
Sbjct 4589  ACAACACCGAGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGAT  4662

Query  328  CTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAGAC  401
            ||||||||||||||.|||||||||||.|||||||||||||||||.||.||||||||.|||||||||||||||||
Sbjct 4663  CTGAAACCTCACCTCGCACAGCTCACGGGGAGCAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGAC  4736

Query  402  CACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  447
            .||||||||||||||||||||.|||||.|||||.|||||.||||||
Sbjct 4737  TACCAACAGCAACAGCAGCTCTTCCTCTGATGTGTCCACACACAGC  4782

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