Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017312764.1
Aligned Length:
4524
Identities:
402
Gaps:
4077

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAACCGAGAATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAAGCGGCTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTCGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTGGGAGATGCTAAAGACTCCGTGAGGGAGCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGTGAACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAATGTCATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAAAAGTCTGGAAATATGATACAGTCTGCAAATGAAAAAAATTTTGATGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATGTTAACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGGACCACCCGTAGGCTCATGTCATCCAGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGCGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGATGAAGAGGATTTTATTAAAGCCTTTGATGATGTACCTGTAGTGCAGATTTACTCCAGCCGAGACCTCGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATCAGAGAAATCCTGTCAGATGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGCTTGTATCACATTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGAAATAAGTTTGATCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATCCCGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCGGCACACTCACATCCCTCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCGTCAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATATCAGTATTAGCTGAAACAATAAAGAAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGGTCGGATCCGCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAAGTGGTTTCACAGTCTCAGCGATCCAGATCTGCTAACCCTGCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAAGCTTTTGGGAAGTGGACTTGCTGGGGGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCAAGATCCCCAGGAGTCAGGGATGTAGCCGAGAAACAAGTCCTAACCGGATTGGATTAGATCGGTTTGGGCTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTCTTGAGTACCAGCACTGACCTGGAAGCAGC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGAGAAGGAGATACGAGCCCTATG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTCCAGGAAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGTGGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTTCCAACTG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGAGTAGAAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTCAGTATGTTTTTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAGACCCTCGTGGATTTTATAATCATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTCCTTCTCACACAACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACTTAAGAAAATGGGAGCAGACTTACTTGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGTCACCAGGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAGACTCAAACTCCAAACCTC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAGGTCAAAGTAGCAATCCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTGTAAATTC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAGCGAAACAAGACTAGCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTGAGAAAGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CAGCACAAATTGTGCTCATCTCTCTGTTTGAACTGAACACGCCTGAATTTACCATGTTACTTGGTGCCTTGCCA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAAACATTCCAGGATGGTGCCACCAAACTCCTGCATAACCACCTCAAGAACTCCAGTAACACCGGTGTGGGATC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ACTGTTCCCATGGGGGACTATCTCCAAGTCGGTTGTGGGGTTGGAGTGCCGACGGGCTATCGAAGCCCCCACCT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCCTTTTCTCAGCCTAACTCCATTCCCACCGCTCCCTCCCACAAGACTCTCAGGCGCTCTTACTCTCCCAGCAT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAATCTACAGCTCTTTGCGTGGAGTTACAGAAGCCATTG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGGGAGGTAGTGAGATAGAAGGAGGCAGGAT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATAACCCGTATCCCTACTCCGACACCATCAACACCTATGACAAGACGGCTCTGAAGGAAGCAGTGTTTGACGAT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCTCAAGATCACCAGGGAGGACAGCCTGG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  GCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTGCTGCTGGAAACTCTCGGAGACAAAGACCATTCCATT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAAAAACTATGCAGAACT  4070

Query    1  -------ATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGT  67
                   ||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||||.|
Sbjct 4071  GACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAGAGCGGCCGAGGAAGCTGCAT  4144

Query   68  CCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTAC  141
            ||||.||.|||||.||.||||||||.||||||||||||||.|||||.||.||.|||||||||||.|||||||||
Sbjct 4145  CCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAATCATCCAGACAGCCGACTAC  4218

Query  142  CCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCT  215
            |||||||||||.|||||.||||||||||||||.||.||.||.|||||||||.|.||||||||.|||||||||||
Sbjct 4219  CCCATCAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCAGCT  4292

Query  216  CCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGT  289
            |||.||||||||||||||.|||.|||||||||||||.|||||||||||.||.|||||.||.||.|||||.||||
Sbjct 4293  CCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACGACAACACCGAGAGCAGTGTACGGAAAGCCAGTGTGT  4366

Query  290  TTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAG  363
            ||||||||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||
Sbjct 4367  TTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGATCTGAAACCTCACCTCGCACAGCTCACGGGGAGCAAG  4440

Query  364  ATGAAGCTACTAAACTTATACATAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTC  437
            ||||||||.||.||||||||.|||||||||||||||||.||||||||||||||||||||.|||||.|||||.||
Sbjct 4441  ATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTCTTCCTCTGATGTGTC  4514

Query  438  CACGCACAGC  447
            |||.||||||
Sbjct 4515  CACACACAGC  4524

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