Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017312784.1
Aligned Length:
4488
Identities:
402
Gaps:
4041

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAACCGAGAATGGAGTCCTGTCTGGCCCAGGTGCTGCAGAAGGATGTGGGAAAGCGGCTGCAGGTTGGCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAACTCATAGACTATTTCTCAGACAGACAGAAGTCTGCTGACCTTGAGCACGACCAGACCCTGTTGGATAAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGGATGGACTCGCTACCTCTTGGGTGAACTCTAGCAATTACAAGGTGGTTCTCTTGGGCATGGACATCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCACTGGTGACTAGGCTGCAGGACCGGTTCAAGGCGCAAATCGGCACAGTGTTGCCAAGTCTAATAGACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACTGGGAGATGCTAAAGACTCCGTGAGGGAGCAAGACCAAACCCTGCTGCTAAAGATCATGGATCAAGCTGCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCCCCAGTATGTGTGGGACAGAATGCTCGGAGGCTTCAAACACAAGAACTTCCGCACAAGAGAGGGCATCTGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCTGCCTTATTGCAACACTCAATGCCTCTGGGGCCCAGACTCTAACACTAAGCAAGATTGTGCCACATATATG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACCTACTGGGAGATCCCAACAGCCAGGTTCGAGACGCAGCAATAAACAGTCTGGTGGAGATTTATAGACATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGGTGAACGTGTGAGGGCAGACCTCAGTAAGAAAGGACTGCCACAGTCCCGGTTGAATGTCATTTTTACAAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTGATGAAGTCCAAAAGTCTGGAAATATGATACAGTCTGCAAATGAAAAAAATTTTGATGATGAAGATTCTGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGATGGCAACAGGCCTTCTTCTGCCAGCTCCTCATCATCCAAGGCCCCATCAAGTTCCCGGAGGAATGTTAACC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGGACCACCCGTAGGCTCATGTCATCCAGTCTTGGATCTAAGTCTTCAGCTGCAAAAGAAGGCGCTGGTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGATGAAGAGGATTTTATTAAAGCCTTTGATGATGTACCTGTAGTGCAGATTTACTCCAGCCGAGACCTCGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAATCCATAAACAAAATCAGAGAAATCCTGTCAGATGACAAGCATGACTGGGAGCAGAGAGTAAATGCTCTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAAGATTAGATCGTTACTCTTGGCTGGGGCTGCTGAGTACGATAACTTCTTTCAACACTTGCGTCTTCTGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAAGCTTGTATCACATTGGGGCATCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCATCAGTTCTGGGAAATAAGTTTGATCATGGAGCTGAAGCCATTATGCCAACTATCTTTAATTTAATCCCGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCTAATCATTCGGCACACTCACATCCCTCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCGTCAGAAGGCGCTGTTTTGAATTTTTAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATATCAGTATTAGCTGAAACAATAAAGAAAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTGCTACTGGGGTTTCCACAGTCACTTCAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGAAGGCCCTACAGTCCCACTTGAAGAACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGCTCTCAAGAGAGTCTCAACCGGCCACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTACAGTTAGTACCAAATCTGTGTCGACGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGATCCTATGCGTCCCTAGGTCGGATCCGCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGAGACGGCAGAGCTCGGGGAGCACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAAGTGGTTTCACAGTCTCAGCCTGGCAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTTGCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGGATGTA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCCGAGAAACAAGTCCTAACCGGATTGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTCAGGGG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCTTCACACCACTCGATCGGTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTCTTGAGTACCAGCACTGACCTGG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGAGAAGGAGATACGAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCTATGGAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATATGGCTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGCCAGTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGAGTCGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTCAGTAT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTTTTTGGAGACCCTCGTGGATTTTATAATCATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTCCTTCTCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CACAACTACTTAAGAAAATGGGAGCAGACTTACTTGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCGATGTC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ACCAGGGATTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAGACTCAAACTCC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AAACCTCAAGGTCAAAGTAGCAATCCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGATTTTG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TAAATTCCAGCGAAACAAGACTAGCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAGACGTG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AGAAAGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAACTGAACACGCCTGAATTTACCATGTTACTTGGTGC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCATAACCACCTCAAGAACTCCAGTAACACCGGTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGACCTCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCCACCAACTGTTCCCATGGGGGACTATCTCCAAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  AATCTACAGCTCTTTGCGTGGAGTTACAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AGCCAATCAAACGAGATGGCAAGAAGGATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAGGGCCGGGGAGGTAGTGAGATAGAAGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GCCTCCACGTGCCTTTCCGGGGCCAAGAGCACGGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATGACAAGACGGCTCTGAAGGAAGCAGTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCAC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TCAGACCTGGTGGCTGACTTGCTGAAAGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  GCTGGAGTTGCTCAAGATCACCAGGGAGGACAGCCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGC  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TGCTGCTGGAAACTCTCGGAGACAAAGACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTG  3996

Query    1  ---------------------------------------------ATGAAGACTCTGGAAGCCCACAAAGACTC  29
                                                         |||||||||||||||||||||||||||||
Sbjct 3997  AGAAACCAGCCAGCAAGATTCAAAAACTATGCAGAACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTC  4070

Query   30  CCATAAGGAGGTGGTGAGAGCGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCA  103
            |||.||||||||||||||||||||.|||||.|||||.|||||.||.|||||.||.||||||||.||||||||||
Sbjct 4071  CCACAAGGAGGTGGTGAGAGCGGCCGAGGAAGCTGCATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCA  4144

Query  104  TCAAGGTGCTCTGCCCCATCATCCAGACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAA  177
            ||||.|||||.||.||.|||||||||||.||||||||||||||||||||.|||||.||||||||||||||.||.
Sbjct 4145  TCAAAGTGCTGTGTCCAATCATCCAGACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATGCAGACAAAG  4218

Query  178  GTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTA  251
            ||.||.|||||||||.|.||||||||.||||||||||||||.||||||||||||||.|||.|||||||||||||
Sbjct 4219  GTGGTGGAGAGGATCACCAAGGAGTCCTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTA  4292

Query  252  TGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAG  325
            .|||||||||||.||.|||||.||.||.|||||.||||||||||||||||||||.|||||||||||||||||||
Sbjct 4293  CGACAACACCGAGAGCAGTGTACGGAAAGCCAGTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAG  4366

Query  326  ACCTGAAACCTCACCTTGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAG  399
            |.||||||||||||||.|||||||||||.|||||||||||||||||.||.||||||||.|||||||||||||||
Sbjct 4367  ATCTGAAACCTCACCTCGCACAGCTCACGGGGAGCAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAG  4440

Query  400  ACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGC  447
            ||.||||||||||||||||||||.|||||.|||||.|||||.||||||
Sbjct 4441  ACTACCAACAGCAACAGCAGCTCTTCCTCTGATGTGTCCACACACAGC  4488

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