Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11720
Subject:
XM_017312819.1
Aligned Length:
3426
Identities:
402
Gaps:
2979

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCAACTATCTTTAATTTAATCCCGAACAGTGCCAAAATTATGGCTACTTCTGGTGTTGTAGCTGTTAGGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AATCATTCGGCACACTCACATCCCTCGGCTGATCCCTGTCATAACCAGCAACTGTACCTCTAAGTCTGTCGCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAGAAGGCGCTGTTTTGAATTTTTAGATTTGCTTTTACAAGAATGGCAGACACATTCACTAGAAAGACATATA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCAGTATTAGCTGAAACAATAAAGAAAGGAATACACGACGCTGATTCTGAAGCGAGAATAGAAGCCAGGAAGTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTACTGGGGTTTCCACAGTCACTTCAGCCGAGAAGCAGAACACCTGTACCACACTTTGGAGTCCTCGTATCAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGCCCTACAGTCCCACTTGAAGAACTCGGACAGCATCGTGTCTCTGCCCCAGTCAGACCGATCCTCTTCCAGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTCAAGAGAGTCTCAACCGGCCACTTTCAGCCAAAAGAAGTCCCACTGGCAGCACTGCATCCAGAGGCTCTAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGTTAGTACCAAATCTGTGTCGACGACAGGATCTCTCCAGCGATCTCGAAGTGATATTGATGTGAACGCAGCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAGTGCCAAATCCAAAGTCTCCTCATCCTCAGGATCCCCCGCCTTCAGCTCTGCAGCAGCACTGCCCCCAGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCCTATGCGTCCCTAGACGGTACTACCACTAAAGCGGAGGGTCGGATCCGCACGAGACGGCAGAGCTCGGGGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CACCACCAATGTCGCCTCCACACCCTCCGACAGTCGGGGCCGCAGTCGCGCCAAAGTGGTTTCACAGTCTCAGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GATCCAGATCTGCTAACCCTGCTGGTGCTGGCAGCCGGTCAAGTTCCCCTGGGAAGCTTTTGGGAAGTGGACTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTGGGGGTTCCTCCAGAGGCCCACCGGTAACACCATCCTCAGAAAAACGGAGCAAGATCCCCAGGAGTCAGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATGTAGCCGAGAAACAAGTCCTAACCGGATTGGATTAGCACGGAGCAGCCGTATCCCCCGACCCAGCATGAGTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGCGATACAAGCCCTGCTCGGGGCTTCACACCACTCGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGGTTTGGGCTGGGCCAGTCAGGACGAATCCCTGGTTCTGTGAACGCCATGAGAGTCTTGAGTACCAGCACTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCTGGAAGCAGCAGTGGCTGACGCTCTGCTGTTAGGAGACGCCAGGAGCAAGAAGAAGCCTGTGAGAAGGAGAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACGAGCCCTATGGAATGTACTCTGATGATGATGCCAACAGTGATGCCTCCAGCGTGTGCTCTGAGCGCTCATAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAAGATGTAGCAGAGGTTCTCAACCATTGTGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAGTTCCAACTGGTCAGAACGGAAAGAGGGGCTCCTGGGCCTGCAGAACTTACTGAAGAGCCAAAGAACACTGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTCGAGTAGAATTGAAGAGACTGTGTGAGATTTTCACCCGAATGTTTGCCGACCCTCACAGCAAGAGAGTTTTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTATGTTTTTGGAGACCCTCGTGGATTTTATAATCATTCATAAGGATGACTTGCAAGACTGGCTCTTCGTCCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCTCACACAACTACTTAAGAAAATGGGAGCAGACTTACTTGGATCTGTGCAAGCAAAAGTTCAGAAGGCTCTCG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATGTCACCAGGGATTCCTTTCCATTTGATCAACAATTTAACATTTTGATGAGATTTATTGTGGATCAGACTCAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACTCCAAACCTCAAGGTCAAAGTAGCAATCCTGAAATACATCGAATCTCTAGCCAGACAGATGGACCCCACAGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTTTGTAAATTCCAGCGAAACAAGACTAGCTGTTTCTAGGATCATAACATGGACTACAGAACCAAAGAGTTCAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACGTGAGAAAGGCAGCACAAATTGTGCTCATCTCTCTGTTTGAACTGAACACGCCTGAATTTACCATGTTACTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCATAACCACCTCAAGAACTCCAGTAACAC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CGGTGTGGGATCTCCAAGCAATACAATTGGCCGGACACCTTCCCGCCACCCCAGCAGCAGGACCAGCCCCCTGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCTCACCCACCAACTGTTCCCATGGGGGACTATCTCCAAGTCGGTTGTGGGGTTGGAGTGCCGACGGGCTATCG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AAGCCCCCACCTCCCTTTTCTCAGCCTAACTCCATTCCCACCGCTCCCTCCCACAAGACTCTCAGGCGCTCTTA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTCTCCCAGCATGCTGGACTATGATACAGAGAACCTGAACTCTGAAGAAATCTACAGCTCTTTGCGTGGAGTTA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CAGAAGCCATTGAAAAGTTCAGCTTCCGAAGCCAGGAGGATCTAAATGAGCCAATCAAACGAGATGGCAAGAAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GATTGTGATATCGTGTCCCGAGATGGGGGAGCAGCCTCACCTGCCACCGAGGGCCGGGGAGGTAGTGAGATAGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGGAGGCAGGATGGCTTTGGACAACAAGACCTCCCTGCTCAACACGCAGCCTCCACGTGCCTTTCCGGGGCCAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAGCACGGGAATATAACCCGTATCCCTACTCCGACACCATCAACACCTATGACAAGACGGCTCTGAAGGAAGCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTGTTTGACGATGACATGGAGCAGCTCCGAGATGTGCCCATTGACCACTCAGACCTGGTGGCTGACTTGCTGAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGAGCTATCTAACCACAACGAGCGTGTGGAGGAGCGGAAGGGCGCACTGCTGGAGTTGCTCAAGATCACCAGGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGGACAGCCTGGGCGTGTGGGAGGAGCACTTCAAGACCATCCTGCTGCTGCTGCTGGAAACTCTCGGAGACAAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GACCATTCCATTCGAGCTCTGGCACTGAGAGTTTTACGGGAAATTCTGAGAAACCAGCCAGCAAGATTCAAAAA  2960

Query    1  -------------------ATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTG  55
                               ||||||||||||||||||||||||||||||||.||||||||||||||||||||.|
Sbjct 2961  CTATGCAGAACTGACGATCATGAAGACTCTGGAAGCCCACAAAGACTCCCACAAGGAGGTGGTGAGAGCGGCCG  3034

Query   56  AGGAGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAG  129
            ||||.|||||.|||||.||.|||||.||.||||||||.||||||||||||||.|||||.||.||.|||||||||
Sbjct 3035  AGGAAGCTGCATCCACGCTAGCCAGCTCAATCCACCCAGAGCAGTGCATCAAAGTGCTGTGTCCAATCATCCAG  3108

Query  130  ACGGCCGACTACCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTC  203
            ||.||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||||||.|.||||||||
Sbjct 3109  ACAGCCGACTACCCCATCAACCTGGCTGCTATCAAGATGCAGACAAAGGTGGTGGAGAGGATCACCAAGGAGTC  3182

Query  204  ATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTA  277
            .||||||||||||||.||||||||||||||.|||.|||||||||||||.|||||||||||.||.|||||.||.|
Sbjct 3183  CTTGCTGCAGCTCCTCGTCGACATCATCCCCGGCCTGCTGCAGGGTTACGACAACACCGAGAGCAGTGTACGGA  3256

Query  278  AGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGCTC  351
            |.|||||.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||
Sbjct 3257  AAGCCAGTGTGTTTTGCTTAGTGGCAATCTATTCCGTAATCGGAGAAGATCTGAAACCTCACCTCGCACAGCTC  3330

Query  352  ACAGGGAGCAAGATGAAGCTACTAAACTTATACATAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTCCTC  425
            ||.|||||||||||||||||.||.||||||||.|||||||||||||||||.||||||||||||||||||||.||
Sbjct 3331  ACGGGGAGCAAGATGAAGCTGCTGAACTTATATATAAAGAGGGCCCAGACTACCAACAGCAACAGCAGCTCTTC  3404

Query  426  CTCCGATGTCTCCACGCACAGC  447
            |||.|||||.|||||.||||||
Sbjct 3405  CTCTGATGTGTCCACACACAGC  3426

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