Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11931
Subject:
XM_006538567.4
Aligned Length:
1768
Identities:
854
Gaps:
803

Alignment

Query    1  --------------ATGG--CGACTGATACGTCTC-------------------AAGGTGAACTCGTC--CA--  35
                          .|||  |||||  |.||.|.|                   |..||.||||.|||  ||  
Sbjct    1  ATGCTCCGAGGCCTGTGGCCCGACT--TCCGCCGCGCCCTCCTCCCCTCGGCCTACTGTCAACTTGTCTTCAAG  72

Query   36  -----TCCTAA-------GGCACTCCCACTTATAGT-AGGAGCT------------------CAGCTGATCCAC  78
                 |.|.||       |||||         |||| ||..|||                  |.|||..|||.|
Sbjct   73  CCCGGTTCGAAAGATGCCGGCAC---------TAGTGAGTGGCTGCGGCGGGCCCGCCCTCCCGGCTTCTCCGC  137

Query   79  ----------------GCGGACAAGTTAGGTGAG------------GTAGAAGATAGCACCATGCCGATTCGTC  124
                            ||.|.||  |||.| |||            |.||||||||.|||||||||.||.||||
Sbjct  138  CCCCGCCGCCGCCGTGGCCGCCA--TTACG-GAGTCCCCAGTGAAAGCAGAAGATACCACCATGCCTATACGTC  208

Query  125  GAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCA  198
            ||.|.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||       
Sbjct  209  GAGCCGTGAATTCTACCCGGGAAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACC-------  275

Query  199  GACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGA  272
                                            |||||||||.||||||||.||||||||||||||.||.|||||
Sbjct  276  --------------------------------AGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGA  317

Query  273  GGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCA  340
            ||||||||||||.||||||||.|||||||.||.|||||||||||      |.||.||||||.||||||||.|||
Sbjct  318  GGCAGAGCAGCCCAAGGGGGAGCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCA  391

Query  341  AAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTT  414
            |||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||.|||||||.||.||.
Sbjct  392  AAAAGGATGAGAAGGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACTCTC  465

Query  415  TCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAAT  488
            ||||||||||||||||||||||||||||.||||||.||.||||||||.||||||||.|||||||||||.|||||
Sbjct  466  TCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGCAAT  539

Query  489  CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCC  562
            |||||||||||||||||||||||||||||||||||.|||.||.||.||||||||.||||||||.||||||||.|
Sbjct  540  CTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCATTC  613

Query  563  ATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGA  636
            |||||||.||.|||||||..||||||||||||||.|||||.||.||.|||||.|||||.|||||.|||||.|||
Sbjct  614  ATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAACAGA  687

Query  637  GGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACC  710
            ||||||||||.||||||.||||||||||||||.|||||.||||||||||||||.||||||||   ||||.||||
Sbjct  688  GGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATC---AAAACCACC  758

Query  711  TCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCC  784
            |||||||||||.||||||||||||   |.||||.||..|||||||||||||||||||||||.||||.|||||.|
Sbjct  759  TCAGAAATCCAAAAACAGAAAGAA---GGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTC  829

Query  785  TCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAG  858
            ||||..||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  830  TCCCGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAG  903

Query  859  TATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGG  932
            |||||.||||||||.|||||||||||||||||.|||.||||||||||.|||||||||.|||||||||||||.||
Sbjct  904  TATTACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGG  977

Query  933  CCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCC------AGAAAT--GGGGTTTCGCC-----  993
            ||||.|.||.||||||||||||||.|||||||||||||||||.|      ||||||  ||||....|||     
Sbjct  978  CCAGCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGC  1051

Query  994  ---GTG---------------------------------TTGC--CCAGG------------------------  1005
               |||                                 ||||  |||.|                        
Sbjct 1052  TGGGTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACC  1125

Query 1006  -CTACTCTTGAA-------CTCCTGGGTTCAG------------------------------------------  1029
             ||.||| ||||       .||||||    ||                                          
Sbjct 1126  ACTGCTC-TGAAGAAGTATGTCCTGG----AGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTG  1194

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1195  AAAAAAACCCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTT  1268

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1269  CCAGCTGTCCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATG  1342

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1343  AAGATGAAGATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTA  1416

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1417  CAGAAGAAAACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAA  1490

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1491  AGTCCCGGCTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCA  1564

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1565  GGAAAGCCAGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCA  1638

Query 1030  ------------------------------------------------------------------  1029
                                                                              
Sbjct 1639  CGAAAGGAAGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1704

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