Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12101
Subject:
XR_001741262.2
Aligned Length:
3364
Identities:
1526
Gaps:
1838

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATAAGGCCTGGCGTTATTGCTTAGAGGCGGCTACCTGGAGCCGGAAGCGCGGCTGCAGCAGGGCGAGGCTCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTGGGGTCGGTTCCGCATCCAGCCTAGCGTGTCCACGATGCGGCTGGGCTCCGGGACTTTCGCTACCTGTTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTAGCGATCGAGGTGCTAGGGATCGCGGTCTTCCTTCGGGGATTCTTCCCGGCTCCCGTTCGTTCCTCTGCCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCGGAACACGGAGCGGAGCCCCCAGCGCCCGAACCCTCGGCTGGAGCCAGTTCTAACTGGACCACGCTGCCAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACCTCTCTTCAGTAAAGTTGTTATTGTTCTGATAGATGCCTTGAGAGATGATTTTGTGTTTGGGTCAAAGGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGAAATTTATGCCCTACACAACTTACCTTGTGGAAAAAGGAGCATCTCACAGTTTTGTGGCTGAAGCAAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCTACAGTTACTATGCCTCGAATCAAGGCATTGATGACGGGGAGCCTTCCTGGCTTTGTCGACGTCATCAGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTCAATTCTCCTGCACTGCTGGAAGACAGTGTGATAAGACAAGCAAAAGCAGCTGGAAAAAGAATAGTCTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TATGGAGATGAAACCTGGGTTAAATTATTCCCAAAGCATTTTGTGGAATATGATGGAACAACCTCATTTTTCGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCAGATTACACAGAGGTGGATAATAATGTCACGAGGCATTTGGATAAAGTATTAAAAAGAGGAGATTGGGACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATTAATCCTCCACTACCTGGGGCTGGACCACATTGGCCACATTTCAGGGCCCAACAGCCCCCTGATTGGGCAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGCTGAGCGAGATGGACAGCGTGCTGATGAAGATCCACACCTCACTGCAGTCGAAGGAGAGAGAGACGCCTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCCAATTTGCTGGTTCTTTGTGGTGACCATGGCATGTCTGAAACAGGAAGTCACGGGGCCTCCTCCACCGAGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGTGAATACACCTCTGATTTTAATCAGTTCTGCGTTTGAAAGGAAACCCGGTGATATCCGACATCCAAAGCAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCCAACAGACGGATGTGGCTGCGACACTGGCGATAGCACTTGGCTTACCGATTCCAAAAGACAGTGTAGGGAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCCTATTCCCAGTTGTGGAAGGAAGACCAATGAGAGAGCAGTTGAGATTTTTACATTTGAATACAGTGCAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTAGTAAACTGTTGCAAGAGAATGTGCCGTCATATGAAAAAGAACTTTGAACTATCACCATTGGCAGCACCCTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGATGCAGTTATCTAAAGTTCTTTCATAAATTTATTCATTCAACAACTATTTACCAGGATCTTGTTATGAATGA  1332

Query    1  -------------------------------------------------------ATGTCAGAAAGATTGCATG  19
                                                                   |||||||||||||||||||
Sbjct 1333  GAGGCTGTTAACAGGCACTGGAGACAGAGCAGATCCTGGGTTTGAGCAGTTTAAAATGTCAGAAAGATTGCATG  1406

Query   20  GGAACTGGATCAGACTGTACTTGGAGGAAAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGG  93
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGAACTGGATCAGACTGTACTTGGAGGAAAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGG  1480

Query   94  CAGTACCTGGATGCTCTGAAGACGCTGAGCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGAT  167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAGTACCTGGATGCTCTGAAGACGCTGAGCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGAT  1554

Query  168  GATGGTGGGGACTGTCGTGGTTTTGGAGGTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAA  241
            |||                        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAT------------------------GGTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAA  1604

Query  242  AGGCTGAGCTGGAAGTCCCACTGTCATCTCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCG  315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1605  AGGCTGAGCTGGAAGTCCCACTGTCATCTCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCG  1678

Query  316  GCCGTTCACGTCATTGTGTGCACCTCAGCTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGG  389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679  GCCGTTCACGTCATTGTGTGCACCTCAGCTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGG  1752

Query  390  TGGGGTGATGGTGCTGGCCTCGGCGCTGCTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAA  463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753  TGGGGTGATGGTGCTGGCCTCGGCGCTGCTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAA  1826

Query  464  ACACCCCAAGGAAGAACCCCATGCATCCCAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCTGTTGGGGACG  537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1827  ACACCCCAAGGAAGAACCCCATGCATCCCAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCTGTTGGGGACG  1900

Query  538  GCGGGCCACGTCTTGAGCCTGGGCGCCAGCAGCTTCGTGGAGGAGGAGCACCAGACCTGGTACTTCCTTGTGAA  611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901  GCGGGCCACGTCTTGAGCCTGGGCGCCAGCAGCTTCGTGGAGGAGGAGCACCAGACCTGGTACTTCCTTGTGAA  1974

Query  612  CACCCTGTGTCTAGCTCTGAGCCAAGAAACCTACAGAAACTACTTTCTGGGAGATGACGGTGAGCCTCCGTGTG  685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct 1975  CACCCTGTGTCTAGCTCTGAGCCAAGAAACCTACAGAAACTACTTTCTGGGAGATGAC----------------  2032

Query  686  GCCTCTGTGTGGAACAAGGGCATGACGGGGCCACAGCAGCGTGGCAGGACGGGCCTGGCTGTGATGTCCTGGAG  759
                                                                                      
Sbjct 2033  --------------------------------------------------------------------------  2032

Query  760  CGAGACAAAGGCCACGGAAGCCCCTCTACCTCCGAAGTGCTCAGAGGCCGCGAGAAGTGGATGGTGCTGGCCAG  833
                                                                                      
Sbjct 2033  --------------------------------------------------------------------------  2032

Query  834  TCCGTGGCTAATACTGGCCTGCTGCCGGCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGGGCTCACCGGC  907
                                                                                      
Sbjct 2033  --------------------------------------------------------------------------  2032

Query  908  CTGACCTCGGCCACTGGCTCACCAGCTCTGACCACAAAGCCGAGCTCTCTGTCCTGGCTGCCCTCTCCCTCCTC  981
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033  ------------------------GCTCTGACCACAAAGCCGAGCTCTCTGTCCTGGCTGCCCTCTCCCTCCTC  2082

Query  982  GTAGTTTTTGTGCTGGTGCAGAGGGGGTGCTCCCCTGTGTCCAAGGCTGCCCTGGCGCTGGGGCTGCTGGGCGT  1055
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2083  GTAGTTTTTGTGCTGGTGCAGAGGGGGTGCTCCCCTGTGTCCAAGGCTGCCCTGGCGCTGGGGCTGCTGGGCGT  2156

Query 1056  CTACTGCTACCGGGCGGCCATCGGGAGTGTCCGGTTCCCGTGGCGGCCGGACAGCAAGGACATTTCCAAGGGTA  1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157  CTACTGCTACCGGGCGGCCATCGGGAGTGTCCGGTTCCCGTGGCGGCCGGACAGCAAGGACATTTCCAAGGGTA  2230

Query 1130  TTATTGAAGCTCGTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTACTTAAATCT  1203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2231  TTATTGAAGCTCGTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTACTTAAATCT  2304

Query 1204  CAAGTCATTGCTGCAGACTTCAAACTCAAGACTGTAGGTTTATGGGAGATATATAGTGGATTAGTTCTTCTGGC  1277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2305  CAAGTCATTGCTGCAGACTTCAAACTCAAGACTGTAGGTTTATGGGAGATATATAGTGGATTAGTTCTTCTGGC  2378

Query 1278  AGCCTTGCTCTTTAGACCACATAATCTTCCGGTCTTAGCATTTAGCCTCTTGATTCAGACTCTAATGACTAAAT  1351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379  AGCCTTGCTCTTTAGACCACATAATCTTCCGGTCTTAGCATTTAGCCTCTTGATTCAGACTCTAATGACTAAAT  2452

Query 1352  TCATCTGGAAGCCCCTGAGACACGATGCAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAGCATTCTTC  1425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2453  TCATCTGGAAGCCCCTGAGACACGATGCAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAGCATTCTTC  2526

Query 1426  TATTTTCAGGGCAACTCCAACAACATTGCCACCGTGGACATCTCCGCAGGCTTCGTGGGCTTAGACACCTACGT  1499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2527  TATTTTCAGGGCAACTCCAACAACATTGCCACCGTGGACATCTCCGCAGGCTTCGTGGGCTTAGACACCTACGT  2600

Query 1500  GGAAATCCCAGCCGTGCTCCTGACAGCGTTTGGGACGTACGCAGGGCCTGTGCTGTGGGCCAGCCACTTAGTGC  1573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2601  GGAAATCCCAGCCGTGCTCCTGACAGCGTTTGGGACGTACGCAGGGCCTGTGCTGTGGGCCAGCCACTTAGTGC  2674

Query 1574  ACTTCCTGAGCTCAGAAACACGCAGTGGTTCAGCACTGAGTCATGCTTGCTTCTGCTACGCACTGATTTGTTCT  1647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2675  ACTTCCTGAGCTCAGAAACACGCAGTGGTTCAGCACTGAGTCATGCTTGCTTCTGCTACGCACTGATTTGTTCT  2748

Query 1648  ATTCCAGTTTTCACGTACATCGTTTTGGTGACATCTCTGCGTTATCATTTATTTATATGGAGTGTATTTTCTCC  1721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2749  ATTCCAGTTTTCACGTACATCGTTTTGGTGACATCTCTGCGTTATCATTTATTTATATGGAGTGTATTTTCTCC  2822

Query 1722  AAAACTTCTCTACGAGGGAATGCACCTGCTCATTACAGCTGCTGTCTGTGTATTCTTCACGGCAATGGATCAAA  1795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2823  AAAACTTCTCTACGAGGGAATGCACCTGCTCATTACAGCTGCTGTCTGTGTATTCTTCACGGCAATGGATCAAA  2896

Query 1796  CCAGACTCACACAGTCT---------------------------------------------------------  1812
            |||||||||||||||||                                                         
Sbjct 2897  CCAGACTCACACAGTCTTAGACTAAGCTGAACACTGGAAAAATAATACATGCTTAAAGTCTGCTGTTATTCTAA  2970

Query 1813  --------------------------------------------------------------------------  1812
                                                                                      
Sbjct 2971  AATGAAAGATATGAATTCAACAAAGTTGATGGATAACTTTCTTTGACTGCTCTACCTGAATTTAGACTAAGCAG  3044

Query 1813  ----------------------------------  1812
                                              
Sbjct 3045  TAAATAGTTTAATAAAAGATCACTTTAATATACA  3078

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