Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12304
Subject:
NM_001321960.2
Aligned Length:
2178
Identities:
479
Gaps:
1698

Alignment

Query    1  ATGAGTGCCATCACAGTGGCCCTTCTCAGCCTCTTGTTTATCACCAGTGGGACCATTGAAAACCACAAAGATTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGAGGCCATTTTTTTTCAACCACCCAAAGCCCTCCAGCCACCCAGGGCTCCACAGCCGCCCAACGCTCCACAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCACCCAGCATTCCACAGCCACCCAGAGCTCCACAGCCACTCAAACTTCTCCAGTGCCTTTAACCCCAGAGTCT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTCTATTTCAGAACTTCAGTGGCTACCATATTGGTGTTGGACGAGCTGACTGCACAGGACAAGTAGCAGATAT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAATTTGATGGGCTATGGCAAATCCGGCCAGAATGCACAGGGCATCCTCACCAGGCTATACAGTCGTGCCTTCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCATGGCAGAACCTGATGGGTCCAATCGAACAGTGTTTGTCAGCATCGACATAGGCATGGTATCCCAAAGGCTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGGCTGGAGGTCCTGAACAGACTGCAGAGTAAATATGGCTCCCTGTACAGAAGAGATAATGTCATCCTGAGTGG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CACTCACACTCATTCAGGTCCTGCAGGATATTTCCAGTATACCGTGTTTGTAATTGCCAGTGAAGGATTTAGCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ATCAAACTTTTCAGCACATGGTCACTGGTATCTTGAAGAGCATTGACATAGCACACACAAATATGAAACCAGGC  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  AAAATCTTCATCAATAAAGGAAATGTGGATGGTGTGCAGATCAACAGAAGTCCGTATTCTTACCTTCAAAATCC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  GCAGTCAGAGAGAGCAAGGTATTCTTCAAATACAGACAAGGAAATGATAGTTTTGAAAATGGTAGATTTGAATG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  GAGATGACTTGGGCCTTATCAGCTGGTTTGCCATCCACCCGGTCAGCATGAACAACAGTAACCATCTTGTAAAC  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  AGTGACAATGTGGGCTATGCATCTTACCTGCTTGAGCAAGAGAAGAACAAAGGATATCTACCTGGACAGGGGCC  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  ATTTGTAGCAGCCTTTGCTTCATCAAACCTAGGAGATGTGTCCCCCAACATTCTTGGACCACGTTGCATCAACA  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  CAGGAGAGTCCTGTGATAACGCCAATAGCACTTGTCCCATTGGTGGGCCTAGCATGTGCATTGCTAAGGGACCT  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  GGACAGGATATGTTTGACAGCACACAAATTATAGGACGGGCCATGTATCAGAGAGCAAAGTCAAAAACATGTAA  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  ACCAGCATTGGGCTACAGTTTTGCAGCTGGCACTATTGATGGAGTTGGAGGCCTCAATTTTACACAGGGGAAAA  1258
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1259  CAGAAGGGGATCCATTTTGGGACACCATTCGGGACCAGATCCTGGGAAAGCCATCTGAAGAAATTAAAGAATGT  1332
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1333  CATAAACCAAAGCCCATCCTTCTTCACACCGGAGAACTATCAAAACCTCACCCCTGGCATCCAGACATTGTTGA  1406
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1407  TGTTCAGATTATTACCCTTGGGTCCTTGGCCATAACTGCCATCCCCGGGGAGTTTACGACCATGTCTGGACGAA  1480
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1481  GACTTCGAGAGGCAGTTCAAGCAGAATTTGCATCTCATGGGATGCAGAACATGACTGTTGTTATTTCAGGTCTA  1554
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1555  TGCAACGTCTATACACATTACATTACCACTTATGAAGAATACCAGGCTCAGCGATATGAGGCAGCATCGACAAT  1628
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1629  TTATGGACCGCACACATTATCTGCTTACATTCAGCTCTTCAGAAACCTTGCTAAGGCTATTGCTACGGACACGG  1702
                                                                                  |.||
Sbjct    1  ----------------------------------------------------------------------ATGG  4

Query 1703  TAGCCAACCTGAGCAGAGGTCCAGAACCTCCCTTTTTCAAACAATTAATAGTTCCATTAATTCCTAGTATTGTG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    5  TAGCCAACCTGAGCAGAGGTCCAGAACCTCCCTTTTTCAAACAATTAATAGTTCCATTAATTCCTAGTATTGTG  78

Query 1777  GATAGAGCACCAAAAGGCAGAACTTTCGGGGATGTCCTGCAGCCAGCAAAACCTGAATACAGAGTGGGGGAAGT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   79  GATAGAGCACCAAAAGGCAGAACTTTCGGGGATGTCCTGCAGCCAGCAAAACCTGAATACAGAGTGGGGGAAGT  152

Query 1851  TGCTGAAGTTATATTTGTAGGTGCTAACCCGAAGAATTCAGTACAAAACCAGACCCATCAGACCTTCCTCACTG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  TGCTGAAGTTATATTTGTAGGTGCTAACCCGAAGAATTCAGTACAAAACCAGACCCATCAGACCTTCCTCACTG  226

Query 1925  TGGAGAAATATGAGGCTACTTCAACATCGTGGCAGATAGTGTGTAATGATGCCTCCTGGGAGACTCGTTTTTAT  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  227  TGGAGAAATATGAGGCTACTTCAACATCGTGGCAGATAGTGTGTAATGATGCCTCCTGGGAGACTCGTTTTTAT  300

Query 1999  TGGCACAAGGGACTCCTGGGTCTGAGTAATGCAACAGTGGAATGGCATATTCCAGACACTGCCCAGCCTGGAAT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  TGGCACAAGGGACTCCTGGGTCTGAGTAATGCAACAGTGGAATGGCATATTCCAGACACTGCCCAGCCTGGAAT  374

Query 2073  CTACAGAATAAGATATTTTGGACACAATCGGAAGCAGGACATTCTGAAGCCTGCTGTCATACTTTCATTTGAAG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  375  CTACAGAATAAGATATTTTGGACACAATCGGAAGCAGGACATTCTGAAGCCTGCTGTCATACTTTCATTTGAAG  448

Query 2147  GCACTTCCCCGGCTTTTGAAGTTGTAACTATT  2178
            ||||||||||||||||||||||||||||||||
Sbjct  449  GCACTTCCCCGGCTTTTGAAGTTGTAACTATT  480

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