Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12729
Subject:
NR_102299.2
Aligned Length:
4780
Identities:
404
Gaps:
4329

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGTCCCTCTCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCTTAGGTTCCGTCTCTCGTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCACACCCCGACATGGATGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCACATCTGGATGCACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAATATGCACGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGTTTTGGTCTGTCATCCCGGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGCAATTCTCCTGCCTCAGCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATGTTGAAGACGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAGCAAGTCATCACATT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTTCGAGTTTCAGTGGAAAGAAGATGAAACAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTGGTAGTACAGGCCAACATGATCAAAGGCATGCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTGCATCTGCCTGAACCGCACATATTTCAGTCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAGCTTCAAATCCTTTAATTGCAGCTCACTCTTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAATGTGATGTATGTGGCAAGGTCTTTAATCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCAAAACATACTATACTTCACACTGGAGAGAAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATCAACCCTTGCACGCCATCATAGACTTCATACT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGCAAAGTTTTCAGTCGCAAATCAAACCTGGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCAGAGGGATTCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGACCTTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCTTCATAGTGGAGAGAAGCCTTAATAGTGTAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAGTGTGGCAAGACCTTCCATCACAATTCAACCCTGTAAGTCATAAGGCAATTCATACTGGAGAGAAACCTTAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAGCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCTTTGCACATCACCATAGACTTCATACTGGAGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAAACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTGTAAATCAAACCTTAAAACACATAAGAAAATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CACATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGGTTTTTGCATATAATGCATATCTGGCAAAACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TACTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATGAGTGTGGCAAGACCGTTGGTCAAAATTCACA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCTTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAGTGGAGAGAAACCTTACAAGCACAATGAATGT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GACATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATAGACTTCATACTGCATAGAAATCTTACAAACG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGAACAATGTGACAAAGTTTTCATTCACAAATCCAGCTTCAAATACATAGGAGAATTCACACTGGAGAAAAGCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATAGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCACACGTGGCACCCCATACTAGAATTCACACTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCA  2812

Query    1  -------------------------------------------------------ATGCTACAACGATTACAAA  19
                                                                   ||||||||||.|||.||.|
Sbjct 2813  ATCCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCACA  2886

Query   20  TCATTGGAGAATCCATAATGAAGAGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGAGATCGTTCAC  93
            |||||||||||||||.|.|||  |||||||||||||||||||||||||||||||||||||||||.||||||||.
Sbjct 2887  TCATTGGAGAATCCACAGTGA--AGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGACATCGTTCAT  2958

Query   94  ATATTGCAGGTCATCGGTGAACTCATACTGGAGAGAAACCTTACAAATGTCATGACTGTGCCAAGGTCTTCAGT  167
            ...|||||..|||..|||||||||||.||||||||||||||||.|||||||||||.||.|.|||||||||||||
Sbjct 2959  GCCTTGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGAGGCAAGGTCTTCAGT  3032

Query  168  CAAGCTTCATCCTATGCAAAACATAGGAGAATTTATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAA  241
            |||||||||||||||||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 3033  CAAGCTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAA  3106

Query  242  AGCCTTTGCTTCACGTTCACACGTCATTAGACATCAGAGAATCTATACTGGACAGAAATCTTACAAATGTCATC  315
            |||.|||.||||||.|||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct 3107  AGCGTTTACTTCACATTCACACCTCATTAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATC  3180

Query  316  AGTGTGGCAAGGTCTTCAGTCCAAGATCACTCCATGCAGAACATCAGAAAATTCATTTTTGAGATAACCGTTCC  389
            |||||||.|.|||||||||||||||.|||||||.||||||.|||||||.|||||.||||.||||.|...|||.|
Sbjct 3181  AGTGTGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTC  3254

Query  390  CAATGAAATGAGTATAGCAAACCATCAAGCATTAATTGACATTGGAGTCAATTCAGCATTGACT----------  453
            .||||.|.|||||||||||||||||||||||||||||||||||.|||||||.|||||.|||||.          
Sbjct 3255  AAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTAGAGTCAAATCAGCCTTGACCTGAGTTTGTT  3328

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3329  GATTTAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTTATGTTAAGAGGATTGCACTGGGGGCCATGGC  3402

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3403  TCATGCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAGGTCACTGGAGCTCACGAGTTTGAGAACAGCC  3476

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3477  TAGCCAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTTTTTCTTGTTTTTTTTTTGAGATGGAGTCTTG  3550

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3551  CTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCTCCTCCCAGGTTCAAGCAAT  3624

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3625  TCTCCTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGTGCCACCACACCTGGGTAATTTTTTGTGTTTT  3698

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3699  TAGTAGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTATCTTCTGACTTTATGATCCACCCGACTCCAC  3772

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3773  CTCCCAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGGCCTGTTTTTTGTTTCTTTAACAAAAAGTTAT  3846

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3847  AGAGACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGAGTATATAATCATTGAGCGATATTCATTTTTC  3920

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3921  CAATCAGTATGGGATTTATATCTATTTATACATGTTTTTAATCATTTTGATCAATGTTTATAGATTTCAAGGTA  3994

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3995  CAAACCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTTAAGTTCTTTAGCAAATGGAATTGGTTTTTAA  4068

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4069  TTTTCTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTGTTATTCTATTCTGCAA  4142

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4143  ATAAACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGACTCTTTGTGATTTTCTTTACAGAAGGTCATG  4216

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4217  TCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTTGGATGAGTTTGATTTCTTTTGCTATTTCATT  4290

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4291  GTTCTGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCCTACAG  4364

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4365  GAAAAGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGTCATTTCATGGATGGTCTTTGTATTGCTGAGG  4438

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4439  TAAATTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATGACTTGATGTTGACTTTTGTGAAATGCTTTTT  4512

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4513  CTCCATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTTCAAGTGGTATATCACATTGATTTGCTTGACT  4586

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4587  ATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCATATCTACAATCCTTTTAATATCCTCTTGAAT  4660

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4661  ACAGTTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAAAATACATATTATGTGAAAATTGCACATGATG  4734

Query  454  --------------------------------------------  453
                                                        
Sbjct 4735  TCACATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATAA  4778

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