Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12729
Subject:
NR_102301.2
Aligned Length:
4662
Identities:
404
Gaps:
4211

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGTCCCTCTCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCTTAGGTTCCGTCTCTCGTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCACACCCCGACATGGATGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCACATCTGGATGCACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAATATGCACGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTGGTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCTCCATTCTTCATTACTCACACAAAAATGGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAATG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATACT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AACATACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTTTGTGACAAGGCTTTCCAGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTGTGGCAAGACCTTCCATCACAATTCAACCCTGTAAGTCAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAGGCAATTCATACTGGAGAGAAACCTTACAAGCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGCACATCACCATAGACTTCATACTGGAGAGAAACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAATCAAACCTTAAAACACATAAGAAAATTCACATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTTTGCATATAATGCATATCTGGCAAAACATACTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GTGTGGCAAGACCGTTGGTCAAAATTCACACCTTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAGT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GGAGAGAAACCTTACAAGCACAATGAATGTGACATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ACTTCATACTGCATAGAAATCTTACAAACGTGAACAATGTGACAAAGTTTTCATTCACAAATCCAGCTTCAAAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ACATAGGAGAATTCACACTGGAGAAAAGCCATAGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCAC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ACGTGGCACCCCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GGGCAGTCACCACTTATTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACAA  2738

Query    1  -----------ATGCTACAACGATTACAAATCATTGGAGAATCCATAATGAAGAGAGATCTTACAAGTGTAATA  63
                       ||||||||||.|||.||.||||||||||||||||.|.|||  |||||||||||||||||||||
Sbjct 2739  AGTTTTCAGTAATGCTACAACCATTGCACATCATTGGAGAATCCACAGTGA--AGAGATCTTACAAGTGTAATA  2810

Query   64  AATGTGGCAAATTTTTCAGAGATCGTTCACATATTGCAGGTCATCGGTGAACTCATACTGGAGAGAAACCTTAC  137
            ||||||||||||||||||||.||||||||....|||||..|||..|||||||||||.||||||||||||||||.
Sbjct 2811  AATGTGGCAAATTTTTCAGACATCGTTCATGCCTTGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTAT  2884

Query  138  AAATGTCATGACTGTGCCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGAATTTATACAGGAGA  211
            |||||||||||.||.|.||||||||||||||||||||||||||||||||||||||||||.|||.||||||||||
Sbjct 2885  AAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAGA  2958

Query  212  GAAACCTCACAAGTGTGATGATTGTGGCAAAGCCTTTGCTTCACGTTCACACGTCATTAGACATCAGAGAATCT  285
            |||||||||||||||||||||||||||||||||.|||.||||||.|||||||.||||||||||||||||||||.
Sbjct 2959  GAAACCTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACCTCATTAGACATCAGAGAATCC  3032

Query  286  ATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCAAGATCACTCCATGCAGAACAT  359
            ||.||||||||||||||||||||||||||||||||||.|.|||||||||||||||.|||||||.||||||.|||
Sbjct 3033  ATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCAT  3106

Query  360  CAGAAAATTCATTTTTGAGATAACCGTTCCCAATGAAATGAGTATAGCAAACCATCAAGCATTAATTGACATTG  433
            ||||.|||||.||||.||||.|...|||.|.||||.|.|||||||||||||||||||||||||||||||||||.
Sbjct 3107  CAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTA  3180

Query  434  GAGTCAATTCAGCATTGACT------------------------------------------------------  453
            |||||||.|||||.|||||.                                                      
Sbjct 3181  GAGTCAAATCAGCCTTGACCTGAGTTTGTTGATTTAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTTA  3254

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3255  TGTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAGG  3328

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3329  TCACTGGAGCTCACGAGTTTGAGAACAGCCTAGCCAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTTT  3402

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3403  TTCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCAC  3476

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3477  TGCAACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGTG  3550

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3551  CCACCACACCTGGGTAATTTTTTGTGTTTTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTAT  3624

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3625  CTTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGGC  3698

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3699  CTGTTTTTTGTTTCTTTAACAAAAAGTTATAGAGACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGAG  3772

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3773  TATATAATCATTGAGCGATATTCATTTTTCCAATCAGTATGGGATTTATATCTATTTATACATGTTTTTAATCA  3846

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3847  TTTTGATCAATGTTTATAGATTTCAAGGTACAAACCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTTA  3920

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3921  AGTTCTTTAGCAAATGGAATTGGTTTTTAATTTTCTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAACT  3994

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 3995  AATTTTTGGTGCTGTTATTCTATTCTGCAAATAAACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGAC  4068

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4069  TCTTTGTGATTTTCTTTACAGAAGGTCATGTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTTG  4142

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4143  GATGAGTTTGATTTCTTTTGCTATTTCATTGTTCTGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGAG  4216

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4217  AGCATTCTTGCATCATGTGAGATCCTACAGGAAAAGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGTC  4290

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4291  ATTTCATGGATGGTCTTTGTATTGCTGAGGTAAATTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATGA  4364

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4365  CTTGATGTTGACTTTTGTGAAATGCTTTTTCTCCATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTTC  4438

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4439  AAGTGGTATATCACATTGATTTGCTTGACTATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCAT  4512

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4513  ATCTACAATCCTTTTAATATCCTCTTGAATACAGTTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAAA  4586

Query  454  --------------------------------------------------------------------------  453
                                                                                      
Sbjct 4587  ATACATATTATGTGAAAATTGCACATGATGTCACATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATAA  4660

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