Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12773
Subject:
XR_001741332.2
Aligned Length:
3600
Identities:
558
Gaps:
3042

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCGCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGTCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTCCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAAC  222

Query    1  ----ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA  70
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAATATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA  296

Query   71  AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA  370

Query  145  ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA  218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA  444

Query  219  TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA  292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA  518

Query  293  CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG  366
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG  592

Query  367  ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCAT  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCAT  666

Query  441  CGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTC  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTC  740

Query  515  AGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAG-------GAA-----------------------  558
            |||||||||||||||||||||||||||||||||||||||||       |||                       
Sbjct  741  AGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGATTGTCCGAAGATACATCAAGGATTGGCTTGAG  814

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  815  AGAAAGAAGCCTCCTTTTGGTGCTATCAGCAGCAGTGTACTCCTCATGATCATCTACACAACATTCTGTGACAC  888

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  889  GTTCTCTAACCCAAATATTGACCTGGATAAATTCAGCCTTGTTCTCATACTGTTCATAATATTTTCTATCCAGC  962

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  963  TGAGTTTTATGCTTTTAACTTTCATCTTTTCAACAAGGAATAATTCGGGTTTCACACCAGCAGACACAGTGGCT  1036

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1037  ATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCAGGCCATGA  1110

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1111  GCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGTGTTGGTGC  1184

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1185  CAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTATAACAAAGGAGG  1258

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1259  TGGACTTTCTGTAGCAATGTATATATGTACAGGATTGTACATACTAGCAATTCTGAAGACTTGTACTTGTGAAT  1332

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1333  GTTGCCTCAATGCATATTTTATTTTTTTACACAAAAATATGAGATCCTGTTTAAGTGCCTTAAAATGTATTTGA  1406

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1407  CAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTACTGCCAGGGGTGGTACAATATTTGGGGGTTAATTTTGC  1480

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1481  TTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAAAAGCAAACATGCTTTCCCTGCAGCACCTTTGTGCAAT  1554

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1555  ACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAGGTCACACCATCAGGAAAATGCCCTTCTGATGACAGTG  1628

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1629  AAAATTTCCAAAGTCTTATTCATGCATACTTTGATTTACTGTGTGATTCTTTTTTTCTACGACTGTGACATGCC  1702

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1703  TCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAATAGATGCTGAAAAGCGTAAGATATATGCATTCCTTGAC  1776

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1777  ATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCACTCCCATTATGAGAGATTGTGGTT  1850

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1851  ATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGTCTGAATGTTTGAATTATGAGTGAAATCATGTGA  1924

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1925  AATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGTCTTTAAAATATATCTTAATATCTTCTTCCTCTTTATT  1998

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1999  CAATAATTTCTGTCTTGCACTTACACACTCATAACAGCCAAATATGAGGCACAAAAATGTTACAATCAGTTTGA  2072

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2073  AAGCAGCATCAATTAATGGTAGATTCTATTCACATTCCACAACCCAGACCAAATTTTTTTCCTATTACGCAGAT  2146

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2147  GTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAAAGCAGCCTGTTACATCCTGGAATTAAGCACACTTAAG  2220

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2221  ATGAAAAGAACATGCAAAACCATTTAATAACCAAAATATCAAGTAAAATTAGTTCCCAACGGGGCAGCAGCTTT  2294

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2295  CAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGCAAGAACTGTAACTGGACCCAAGTAGAGAATGAAGCCA  2368

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2369  CGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCCCATGCCGTCCTGTCACATCCTCTTACACGTCCTCTCT  2442

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2443  TGATTTGATAGACAATATTGGCATCCTGGGTCTCACTGAGGCCGTGCTATGTCCTCAGCAGCTGTTTTTGTTGT  2516

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2517  TTCGTTATTATGCCCACAACAAAAAATCATTCCTTAGAAACTCACCAAGTTTATCTACTGTGTAAATTTATATT  2590

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2591  ATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCATTGAATAAATTTCATAAGAGTTATTCTCAGTGTGAATT  2664

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2665  TTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTAACCAGGCTGTAGTACACACTGTTATAAAGAATTTTAC  2738

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2739  TTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATTGTGCTTACCTATGGAGCACAGGAAGGCTCTTAGGTTT  2812

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2813  TGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGGAAGTGTCTGTCTGTCTGTCATCTATCTGCCCTATCAT  2886

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2887  AAAAATCTTTCTCCCTAACATTAAAATACTGATCCCCGCCCCCAACTTATCTACCTCTATTGTCTAACACCTAT  2960

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2961  AGTAGGTGTGATCATGGGATAAAATTCAACTGAAAATGCTATGATAACATTTTATCGTTTGCTTTAAAAATGTG  3034

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3035  CTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGGTGGCGTTAGTGATATGTTTATGCCTATTTCTTTTTTT  3108

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3109  TACACAAATTCCTTGGCATATTTTTTCATAAAGAACAAAAAATAAAATCAAAATTTATTTTTAATTCATGCTTA  3182

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3183  TTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTTATGTTTATACACTGTAAAGCTATCTGTTTTATGCATT  3256

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3257  TGTTTTGTCTAAATGTATTTATGAAAGAAATACATTAGATTATATTTATGTTTACTCATTTTTCCACCTGGATT  3330

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3331  TTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATGGGTAATAATGTTGGTATTTTCATGTTTTTTCTTAGTA  3404

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3405  TTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTATTCTGTTAAAAATTAACACACCTCTAGCTAATGTTCAG  3478

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3479  TGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTGGTTAAGTCATAAAGTGGATTATTTATGATGACTGGAA  3552

Query  559  ------------------------------------------------  558
                                                            
Sbjct 3553  GATGAAAATAATTATATGATTAAACAAAGAATGTTTCAGAAATCACAA  3600

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