Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12929
Subject:
NM_001365907.2
Aligned Length:
3790
Identities:
380
Gaps:
3407

Alignment

Query    1  ATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCA  74

Query   75  GAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGAGGGGGTGTCAGCTTCCGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTGGAGGGGGTGTCAGCTTCCGGG  148

Query  149  AGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGCCCGGAGCCACCGCTCTTGT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCGCCCGGAGCCACCGCTCTTGT  222

Query  223  CGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGACGGAGCGGAGTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGACGGAGCGGAGTT  296

Query  297  CCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  297  CCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAGG  370

Query  371  TGCTGGG---------ATTACAGGCA------------------------------------------------  387
                |||         |.||||.|||                                                
Sbjct  371  ----GGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATGGGACGCCCTGCGAGCCTGGCAAGAGGGA  440

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  441  TGTCTGTGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT  514

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  515  GTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCTAATGACCTCAGCCGA  588

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  589  GGCTACAACCAGATCCTCATAGTTCCCATGGGTGCCACCAGCATCCTCATCGACGAGGCTGCTGCCAGCAGGAA  662

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  663  CTTCCTGGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCGAGGCGGCCCGGGCCC  736

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  737  TGCCAGCAGCCAGCACCATCCTGCATTACGAGCGGGGTGCTGAGGGGGACCTGGCCCCTGAGCGACTCCATGCC  810

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  811  CGGGGCCCCACCTCGGAGCCCCTGGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGGTGTGCACTATGAGTA  884

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  885  CCACCTGCCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGCGCGGAGT  958

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  959  GTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACATGTGCCAG  1032

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1033  CGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAGG  1106

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1107  GCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACTGCATCTCGTCTGACG  1180

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1181  GGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGGAAGCCCCCTGCCATTCAGGCC  1254

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1255  TGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGCCCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCGT  1328

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1329  CCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTCCTTGGAAGACC  1402

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1403  GGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCACC  1476

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1477  TGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGCCGCCCAG  1550

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1551  CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCAGCCCTGTCATCTCCCCC  1624

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1625  AGGAGGTCCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTTGGGCCCTCAGGAGTCC  1698

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1699  CCTGCCTCAGACTCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGGGAGA  1772

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1773  ACGAGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGGCCCCGCTCCCTCTCTGCAGCAGCCCC  1846

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1847  CATACCAGCAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAGTCCTCACGGGTGCTGCCCCGAT  1920

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1921  GGCCACACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGGGTG  1994

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1995  CTGCCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTGACAGCA  2068

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2069  CCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCTACAGTCCACAACACCCACCAGCCCCAGGCCCAGCAGAAT  2142

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2143  GAGCCCAGTGAGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTCTTGG  2216

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2217  GGAAGGCTGTGTGGGCCAGCCCAGCCATGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTA  2290

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2291  ACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGC  2364

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2365  CAGGGATCTCTCCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG  2438

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2439  CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTT  2512

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2513  CTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGGGAGGCCCCCCACACCCAGGCCTTTGGAGAATGG  2586

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2587  CCATGGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCA  2660

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2661  CAGCTCCTCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGC  2734

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2735  GGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCT  2808

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2809  GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAG  2882

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2883  CTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGC  2956

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2957  TGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCT  3030

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3031  GGGCCCCTGGGGGCCATCCCCTCTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCG  3104

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3105  GGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCG  3178

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3179  AGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGC  3252

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3253  CGAGTGGCTGTAGAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGT  3326

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3327  CCAGCTCAGAGTTCTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACTGTGACAGTGCCAGAGGGTGATACGG  3400

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3401  CCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCT  3474

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3475  GATGGCCACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTC  3548

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3549  CTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACCGAGGTGAAGGTGGTCTCACCAGCAC  3622

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3623  CCACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTG  3696

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 3697  CAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGC  3770

Query  388  ----------------  387
                            
Sbjct 3771  TCAGCCCATCTGGCAG  3786

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