Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12929
Subject:
XM_011537296.2
Aligned Length:
3037
Identities:
380
Gaps:
2654

Alignment

Query    1  ---------------------ATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTC  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCGTCTCCCGCAGGCTGAGATGCGGCTGCTCCTGCTCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTC  74

Query   54  GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTG  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGAGCCCCTGCAGCCGGACCTGTG  148

Query  128  GAGGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCC  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGGGGGTGTCAGCTTCCGGGAGCGCCCCTGCTACTCCCAGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCC  222

Query  202  GCCCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGC  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGCCCGGGACTTCCGGGCCGAGCAGTGCGC  296

Query  276  GGAGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTG  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAGTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCGGTGGCTGCCCTACTACAGCGCCCCAAACAAGTGTG  370

Query  350  AACTGAACTGCATTCCCAAAGTGCTGGG---------ATTACAGGCA---------------------------  387
            |||||||||||||||||||.|    |||         |.||||.|||                           
Sbjct  371  AACTGAACTGCATTCCCAAGG----GGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATGGGACGCC  440

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  441  CTGCGAGCCTGGCAAGAGGGATGTCTGTGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACT  514

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  515  CGTCCAAGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTT  588

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  589  GACGCTAATGACCTCAGCCGAGGCTACAACCAGATCCTCATAGTTCCCATGGGTGCCACCAGCATCCTCATCGA  662

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  663  CGAGGCTGCTGCCAGCAGGAACTTCCTGGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGA  736

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  737  CCATCGAGGCGGCCCGGGCCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGCGGGGTGCTGAGGGGGACCTG  810

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  811  GCCCCTGAGCGACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGGTCATCGAGCTCATCAGCCAGGAGCCCAA  884

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  885  CCCCGGTGTGCACTATGAGTACCACCTGCCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCAT  958

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  959  GGAGTGACTGCAGCGCGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCC  1032

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1033  TACCCCGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGA  1106

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1107  GACCAAGCGCTGGAAGGCAGGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCG  1180

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1181  TGTACTGCATCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGG  1254

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1255  AAGCCCCCTGCCATTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGCCCTGGGGAGAGTGTTC  1328

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1329  TGTCAGTTGTGGCGTTGGCGTCCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCG  1402

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1403  CAGCGTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGAC  1476

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1477  CAGGCCTGGCATGTTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCAT  1550

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1551  CTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACA  1624

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1625  CGCAGCCCTGTCATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAACCCCTGGATG  1698

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1699  CCGTTGGGCCCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC  1772

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1773  CAGGGGTGACCACAGGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGGCCCCG  1846

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1847  CTCCCTCTCTGCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAGT  1920

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1921  CCTCACGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCCTGGGGCCCCCTG  1994

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 1995  TCAGCAGAGCAGGTACGGGTGCTGCCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAA  2068

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2069  AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCTACAGTCCACAACACCCAC  2142

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2143  CAGCCCCAGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGC  2216

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2217  CACTGCAGCCGGTCCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCGTGCGGTGCCTGCTGC  2290

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2291  CCAGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGC  2364

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2365  TTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGG  2438

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2439  ATCTCTCCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCA  2512

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2513  GTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTTCTGGT  2586

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2587  GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGGGAGGCCCCCCACACCCAGGCCTTTGGAGAATGGCCATG  2660

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2661  GGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCT  2734

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2735  CCTCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTC  2808

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2809  TCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAG  2882

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2883  GCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTG  2956

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct 2957  GCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCATAGCTCACACCTTGTTTCTCCTGGCC  3030

Query  388  ---  387
               
Sbjct 3031  TCA  3033

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