Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12984
Subject:
XM_006538374.1
Aligned Length:
6068
Identities:
1153
Gaps:
4735

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCTTGCTAGGGTCCGGCTCTGGGCACCGAAGGACCTTTCCCTCTCAGGATGGCCAGGGTGGCATTCCAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGGAGCAAAGCGAACAGCTGTGACCTTCCTTTAAAAATGAAGAAAGAGGCAGAAAGCAGCCCTGCTCGTTTTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTATCCCCACCCCCACCCCCGGACACATCGTGCTGCCTGGACGGCGCTTGGCTGACCCTAGAGGGAGGAGCAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGGTGCTGGGGCGGGGTCGCCCAGCCACCGGGCGGGGACTGCCCCACTCACGCGGAACGCCCCCAGCCAGGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACGCGCTCCCATTCAAAGCAGCAGGGCTGCAAGGCCGCTGCAGTGACGCGCCCACCCGGCCCTGTGCTGCGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCCAGCCTGGGGTCCGCAGTTATCGCTCCACAACTCCTCCAGGACCATGGCAAGGCTGGTGACGCGTAACCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCCGGGTTCCTGGCTCGCCTCATCGGTGGCATCTGGTGCCTCCTCTGTGTCGCAGGACAGAGCTGCTCTGCTCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCAGAGGGATGTTCACTTGGCATTTCTGGCCTGCTGGCTGTCCTTCCCACACCCACCCACCACCACTGACCGAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAGCAGAGTGGAAAATCAAAATCCAACCCTCAAAGAAGTATGTGGAGACCAAAGCCAAGGGGCTGTTTTCCTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGGAATTTACACTGATTCGAAGAGAGAGCCTTCATGAAGAGTTCCTGTCTGACTTCTTGAATAGTCACAAAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGAAGACCCGAGTTCCAGGACTGCACGCTCAGAGGAAGACCGTGAAGGCCTCTGGGATGCCTGGGGCCCTTGGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCGAGTGTTCCAGAACCTGTGGTGGGGGTGCCTCCTATTCCCTGAGACGCTGCCTGAGCAGCAAGAGCTGTGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGGAGAAATATTCGATATAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAACA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTTCTGCTCATAACGACGTCAAGTACCATGGACAGCTTTATGAATGGCTTCCTGTATCTAATGACCCCGACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATCCATGCTCACTCAAGTGCCAAGCAAAAGGAACCAGCCTGGTTGTGGAACTAGCACCGAAGGTCTTAGATGGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACGCGATGCTATACAGAATCACTGGATATGTGCATCAGCGGCCTATGCCAAATTGTTGGCTGTGATCACCAGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGGAGCACTGTCAAAGAGGATAACTGTGGAGTGTGCAACGGAGATGGCTCAACGTGCCGGCTGGTCCGAGGGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGTATAAATCTCAGCTCTCTGCAAGTAAATCGGATGACACCGTGGTCGCCATTCCTTACGGCAGCAGACACATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CGCCTTGTCTTAAAAGGGCCAGATCATTTGTATCTGGAGACCAAGACCCTCCAGGGAACTAAAGGTGAAAATAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTGAGCTCTACAGGCATTTTCCTTGTGGACAATTCTACAGTGGACTTCCAGAAACTTCCAGACAAAGAGATAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGAGGATGACTGGGCCACTGACAGCAGATTTCATCATCAAGATCCATGACTTGGGACCTGCAGACAGCACCGTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAGTTCATCTTCTACCAGCCCATCATCCACCGATGGAGGGAAACAGACTTCTTTCCTTGCTCAGCAACGTGTGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGAGGCTACCAGCTGACGTCTGCCGAGTGCTATGATCTACGGAGTAACCGTGTGGTGGCCGACCAGTACTGTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACTACTACCCCGAGAACGTCAAGCCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCGTGGACCGCGTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCCTCCTCATGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTTCAGTGGAAGAGTGGAAATGCATGTACACCCCAAAGATGCCAGTCGTGCAGCCCTGCAACATTTTTGACTGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACCTGTGGCCAGGGCCTCAGATACCGCGTGGTACT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTGCATTGACCACCGAGGAATGCACACAGGAGGCTGCAGTGCTAAAACAAAGCCCCACATAAAAGAAGAATGCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCATTCCCACACCGTGCTACAAGCCCAGAGAGAAACTTCCAATAGAGGCCAAGCTGCCATGGTTCAAGCAAGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAGGAGCTAGAGGAAGGAGCTGCAGTGTCTGAAGAGCCTTCGTTCATCCCAGAAGCTTGGTCGGCCTGTACTGT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CACCTGTGGCGTGGGGACACAGGTGCGAATAATAAGATGCCAGGTGCTCCTGCCTTTCTCTCAGTCTGTGGCTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACCTGCCTGCGGATGAATGCGAAGGGCCTAAGCCAGCATCGCAACGTGCCTGTTATGCGGGACCGTGCAACGGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAAACTCCGGAATTTAACCCGGATAACGGAGACGGACTCTTGGGTGGCCTGCAGGACCTGGACGAGCTGTATGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTGGGAATATGAGGGCTTCACCAAGTGCTCTGAGTCATGTGGAGGAGGTGTCCAGGAGGCTGTGGTAAGCTGCC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGAACAAACAGACCCGGGAACTCGCTGATGAGAACCTGTGTGTGACCAGCCGACGGCCCCCGCAGCTCCTGAAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCCTGTAACTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGCCCATGTAGCCTCACCTGTGGGGT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGGCCTGCAGACCAGAGATGTTGTCTGTTCCCACCTACTCTCCAGAGAGATGAACGAGGTGGTTGTCCTGGCCG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATGAGCTGTGCCATCACCCCAAACCCAGCACAGTGCAAGCCTGCAACCGTTTCAATTGCCCCCCAGCCTGGTAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CCTGCACAGTGGCAGCTGTGTTCCAGGACCTGTGGAGGAGGGATTCAGAAACGTGATGTTCTCTGCAAGCAGCG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TATGGCTGACGGCAGCTTCCTGGAGCTTCCAGAGACCTTCTGTTCTGCCTCCAAACCAACCTCCCACCAAGGGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GCAAGAAAGATGACTGCCCCAGTGAGTGGCTTCTCTCAGAGTGGTCAGAGTGCTCTGTGAGCTGTGGGGAGGGC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  ACCCAGACTCGAAGTGCCATTTGCCAGAGGGTGCTGAAAACTGGGGTCTCCACTGTTGTCAATTCTACTTTGTG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CCCTCCCCTGCCCTTCTCTTCCTCCATCAGACCCTGTATGCTGGCAACCTGTGCAAGGCCTGGAAGGCCTTCCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CCAAGCACAGTCCTCACATCGCAGCTGCACGAAACATATACATCCAGACCCGCAGGCAGAGGAAGCTGCACTTC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GTTGTGGGAGGATTTGCTTACCTGCTTCCCAAGACTACCGTGGTGCTCCGGTGTCCCACACGCAGATTCCGCAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCCCCTCATCACGTGGGAAAAGGACGGCCAGCACAGCATCAGCTCGGCTCATGTCACCGTAGCCCCTTTTGGCT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ACCTGAAGATCCATCGCCTCAAGCCCTCAGATGCGGGCATCTACACCTGTTCTGCGGGGCCCGCCCGGGAGCAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTTGTGATTAAGCTCATTGGAGGCAACCGCAAGCTCGTGGCCAGGCCCCTGAGCCTTTGGAGTGAGGAAGAGGA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GGCCCTGCAGGTGAGGAAGACCAATCCAAAAGAAGCCTTGCAAACCCACAAACACCAAAATGGCATCTTCTCCA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ACGGCAGCAAAGCTGAGAAGCGCGGCCTCACTGCAGATCCTGGGAACCGCTATGATGACATTGTGTCTAGGCTG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTGGAGCAGGGCGGCTGGCCAGGAGAGCTCCTGGCCTCGTGGGAGGTGCAGGACTCTGCAGAAAGGAACGCATC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTCAGAAGAGGATCCCAATGCTGAACAGGCCCTCCTGCATCTCCCCTTCACCATGGTGGCCGAGCAGAAGCGTC  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TGGATGACATCCTCAGGAACCTGTCCCAGCAGCCAGAGGAGCTACGGGACCTCTACAGCAAGCACCTGGTGGCC  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CAGCTGGCCCAGGACATCTTCCGAAGCCACCTGGAGAACCAGGATCTGCTTCCTAAGCCCTCTGAGCAGAGGTT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  TCCTCCCATGGCCGTCCCAGCTCACAAACATGTCTCTGGCTTCAGCAGCTCCCTAAGGAGCTCATCTGGAGAGG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  CTGGAGGTGGCTCCCGTAGGCCTCATCGCAAGCCCGCCATCTTGCGGAAGATCTCAGCGGCACAGCAACTCTCA  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  GCCTCGGAGGTAGTCACCCACCTGGGGCAGACTGTGGCTCTAGCCAGTGGGACCCTGAGTGTGCTTCTGCACTG  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  TGAGGCGGTAGGCAACCCAAGGCCCACCATCCACTGGACCAGGAACGGAGAAGCAGTTCAATTCAGTGACAGGA  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCTGATGTGGGTTTCTATACTTGCAAT  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  GCCACAAATGCCTTGGGATATGACTCTGTCTCCATTGCTGTCACATTAGCAGGAAAGCCACTAGTGAAGACATC  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  CCGAATGACTGTGCTCAACACAGAGAAGCCTACAGTCACAGTGGATATCGGTGGCACCGTCAGAACCGTCCGAG  4588

Query    1  ------ATGTG---TTTGACTGATGAGTGGGGTTTTTTGTTTTTTTTTTTCTTCCTAGGAGTGCCTGAAGCTGA  65
                  |||||   .||.||||...|||||                         .|||.||.|||||||||||
Sbjct 4589  GAGTGAATGTGACAATTAACTGCCAAGTGG-------------------------CAGGTGTACCTGAAGCTGA  4637

Query   66  AGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCC-------------------------CCGCACCATCTG  114
            ||||||.||||||||.||||||||||||.||||||||                         || |||||.|||
Sbjct 4638  AGTCACCTGGTTCAGAAATAAAAGCAAATTGGGCTCCTCCCACCACCTGCATGAGGGCTCCTCC-CACCACCTG  4710

Query  115  CACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCT  188
            ||.||.||||||||||||||||||.|.|||||||.|||.|||||.||||||||.|||||||||||.||||||||
Sbjct 4711  CATGAGGGCTCCTTGCTGCTCACAGATGTGTCCTTCTCTGATCAAGGCCTGTATTCCTGCAGGGCAGCCAATCT  4784

Query  189  TCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGGAAGACA  262
            .||.|||||.|.|||.||||||||.|||||.|||||.|||||||||||.|||||||||||||||||||||||||
Sbjct 4785  ACACGGAGAACAGACAGAGAGCACGCAGCTCCTGATTCTAGATCCCCCGCAAGTCCCCACACAGTTGGAAGACA  4858

Query  263  TCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTC  336
            ||||||||||||||...|||||||||||||||||||||||.|||||.|.|||.|||||||||||||||||||||
Sbjct 4859  TCAGGGCCTTGCTCTTAGCCACTGGACCGAACCTTCCTTCGGTGCTTATGTCCCCTCTGGGAACACAGCTGGTC  4932

Query  337  CTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTGGTTTCA  410
            |||||||||||||||||.||||||||||||||||||||||||||||||||...|||.||||||||||||||.||
Sbjct 4933  CTGGATCCTGGGAATTCCGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCCACCCCCAATATCACCTGGTTCCA  5006

Query  411  TGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTG  484
            ...|||.||||||||||.|||||||.|.||.|||||.||.|||||||.||.|||||||||||||||.|.|||||
Sbjct 5007  AAATGGCCAGCCAATTGCCACTGCCCCGGGGCTGACCCACCACATCTGGGGAGCTGGACAGATCCTACGAGTTG  5080

Query  485  CAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCCCAGAATGAGGCAGGGGTGCTCATGCAGAAG  558
            ||||.||.||.||.||..||||||||||.|||||||||||.||.||||||||.||||||...|||.|||||||.
Sbjct 5081  CAAATCTCAGTGGAGGACCTCAAGGGGAGTTCAGCTGCCTGGCTCAGAATGAAGCAGGGACCCTCCTGCAGAAA  5154

Query  559  GCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCG  632
            ||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||.||.||||||||..|
Sbjct 5155  GCCTCTTTGGTGATCCAAGATTACTGGTGGTCTGTGGATAGACTGGCAACCTGCTCCGCATCTTGTGGTAATAG  5228

Query  633  GGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGG  706
            .||..||||.|||||.||..|.|||||..|.|||||||.||||||.||..||||||..|||||..||||.|||.
Sbjct 5229  AGGCATTCATCAGCCGCGACTCAGGTGTTTACTGAACACCACGGAAGTTGACCCTGAGCACTGTACAGGAAAGC  5302

Query  707  TTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCT  780
            .|||.||.||.||||||||..|.||.|||||||||||||||||.||||||||.|||||||||||.||||||||.
Sbjct 5303  CTCGGCCCGCCGTGCAGCCTGTTGCCTGCAACCGGAGAGACTGTCCTTCTCGATGGATGGTGACGTCCTGGTCC  5376

Query  781  GCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGAT  854
            ||||||||||||||.||.||.||||||||.||.|||||.||||||||||||||.|||.|||||||.|||||.||
Sbjct 5377  GCCTGTACCCGGAGTTGCGGTGGAGGTGTACAAACCCGAAGGGTGACCTGTCAGAAGTTGAAAGCTTCTGGTAT  5450

Query  855  CTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGC  928
            .||.|||||.|||||||||||||||||||..||..|.|||||.|||||||||||||||||||||||.|||||||
Sbjct 5451  TTCTACCCCGGTGTCCAATGACATGTGCAGTCAACTGGCCAAACGGCCTGTGGACACCCAGGCCTGCAACCAGC  5524

Query  929  AGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTG  1002
            ||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||.|||.||||||
Sbjct 5525  AGCTCTGTGTGGAATGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATAGGCCCTCGCCTTGCTGTG  5598

Query 1003  CAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAG  1076
            ||.|||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.||
Sbjct 5599  CAGCACAGGCAGGTCTTCTGCCAGACCCGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCCCTCCCCAG  5672

Query 1077  GCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCA  1150
            |||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||
Sbjct 5673  GCCCGTGAGCACCCAAAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTCTGGACCCTATGCA  5746

Query 1151  CAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTG  1224
            |.||.||||||||||||||.|||||||||||||||||.|||||||||||.||.|..||||||||||||||.|||
Sbjct 5747  CGGCAACCTGTGGCAACTATGGCTTCCAGTCCCGGCGGGTGGAGTGTGTTCACGTGCGCACCAACAAGGCTGTG  5820

Query 1225  CCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGAAAACAT  1298
            ||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||.||||.||||||||||||  
Sbjct 5821  CCCGAGCACCTGTGTTCCTGGGGGCCCCGGCCCGCCAACTGGCAACGCTGCAACGTCACTCCATGTGAAAAC--  5892

Query 1299  GGAGTGC-------------AGAGACA--------------------CCACCAGGTACTGCGAGAAGGTGAAAC  1339
              |||.|             ||| |||                    |||.|.|||||    |||  |.|.||.
Sbjct 5893  --AGTACGTTCCAATCCCAAAGA-ACATTCTGCAAATTCCCTACAGGCCATCGGGTAC----AGA--GGGCAAT  5957

Query 1340  AGCTGAAACTCTGCC--AACTCAG----------CCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG  1401
            ..|||..|||..|||  |||.|||          |.|||     ||.|                          
Sbjct 5958  CCCTGGGACTGAGCCTGAACACAGGGCACTGGATCAAGT-----TCCC--------------------------  6000

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