Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13092
- Subject:
- XM_017020967.1
- Aligned Length:
- 1866
- Identities:
- 531
- Gaps:
- 1326
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAACAAATTGAATTTTCATAACAACAGAGTCATGCAAGACCGCCGCAGTGTGTGCATTTTCCTTCCCAACGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAATCTCTGAACATCATCATAAATGTTAAGATTCTGTGTCACCAGTTGCTGGTCCAGGTTTGTGACCTGCTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTAAAGGACTGCCACCTCTTTGGACTCAGTGTTATACAAAATAATGAACATGTGTATATGGAGTTGTCACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCTTTACAAATATTGTCCAAAAGAATGGAAGAAAGAGGCCAGCAAGGTACGACAATACGAAGTCACTTGGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCGACCAATTTGGGCCTCCTATGATCATCCACTTCCGTGTGCAGTACTATGTGGAAAATGGCAGATTGATCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGACAGAGCAGCAAGATACTATTATTACTGGCACCTGAGAAAACAAGTTCTTCATTCTCAGTGTGTGCTCCGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGAGGCCTACTTCCTGCTGGCAGCCTTTGCCCTGCAGGCTGATCTTGGGAACTTCAAAAGGAATAAGCACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAAAATACTTCGAGCCAGAGGCTTACTTCCCATCTTGGGTTGTTTCCAAGAGGGGGAAGGACTACATCCTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCACATTCCAAACATGCACAAAGATCAGTTTGCACTAACAGCTTCCGAAGCTCATCTTAAATATATCAAAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCTGTCCGACTGGATGACGTCGCTGTTCATTACTACAGATTGTATAAGGATAAAAGGGAAATTGAAGCATCGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACTCTTGGATTGACCATGAGGGGAATACAGATTTTTCAGAATTTAGATGAAGAGAAACAATTACTTTATGATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCCTGGACAAATGTTGGAAAATTGGTGTTTGTGGGTAAGAAATTTGAGATTTTGCCAGATGGCTTGCCTTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCCGGAAGCTCATATACTACACGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAACTTCTGAGCAACAGCCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGCCTCTATATGAATCTGCAGCCTGTCCTGCGCCATATCCGGAAGCTGGAGGAAAACGAAGAGAAGAAGCAGT 1036
Query 1 --------------------------------------ATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGG 36
||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCGGGAATCTTACATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGG 1110
Query 37 AGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTC 1184
Query 111 GGGCATTGAGGCAGACACCAAGCCCCGGGACACAGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA 184
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA 1258
Query 185 AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGAC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGAC 1332
Query 259 CGGCTGGAAGAGGACTTACAGGACGATGAAATAGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCAGATGAA 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CGGCTGGAAGAGGACTTACAGGACGATGAAATAGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCAGATGAA 1406
Query 333 TGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCATCTACATCACAGAGGACATGCTCATGTCGCGGAAGCTGA 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCATCTACATCACAGAGGACATGCTCATGTCGCGGAAGCTGA 1480
Query 407 ATGGACACTCTGGGTTGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAGCTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATGGACACTCTGGGTTGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAGCTT 1554
Query 481 CGTGGCCAGAGTACTGATTCTCTTCCACAGACTATATGTCGGAAACCAAAGACCTCCACTGATCGACACAGCTT 554
||||||||||||||||||||||||||||||.| |.|||||||.||| .|.||.||..|||
Sbjct 1555 CGTGGCCAGAGTACTGATTCTCTTCCACAGCC-------CAGAAACCACAGA---------TTGGAAACCACTT 1612
Query 555 GAGCCTCGATGACATCAGACTTTACCAGAAAGACTTCCTGCGCATTGCAGGTCTGTGTCAGGACACTGCTCAGA 628
||
Sbjct 1613 -----TC------------------------------------------------------------------- 1614
Query 629 GTTACACCTTTGGATGTGGCCATGAACTGGATGAGGAAGGCCTCTATTGCAACAGTTGCTTGGCCCAGCAGTGC 702
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 703 ATCAACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATACTTTTCTCTGGATCTCACTCATGATGAAGT 776
Sbjct 1615 -------------------------------------------------------------------------- 1614
Query 777 TCCAGAGTTTGTTGTG 792
Sbjct 1615 ---------------- 1614
