Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13279
Subject:
NM_178726.3
Aligned Length:
1086
Identities:
626
Gaps:
393

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATAGAGGATACAATGACTTTGCTGTCTCTGCTGGGTCGCATCATGCGCTACTTCTTACTGAGACCCGAGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTTTTCCTGCTGTGCATCAGCTTGGCTCTCTGGAGTTACTTCTTCCACACGGACGAAGTGAAGACCATCGTTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTCTAGCCGGGACGCGGTGAAGATGGTGAAGGGCAAGGTGGCCGAGATTATGCAGAACGATCGTCTTGGAGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTTGATGTGCTGGAGGCCGAGTTTTCCAAGACCTGGGAATTCAAGAGCCATAATGTGGCGGTGTACTCCATCCA  296

Query    1  ----------------------------------------------------------------------ATGC  4
                                                                                  ||  
Sbjct  297  GGGCCGGAGAGACCACATGGAAGATCGCTTCGAAGTTCTCACCGATCTAGCCAACAAGACGCACCCGTCCAT--  368

Query    5  CTGC----TTTTTCA-----AC--------AACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTA  61
            ||.|    |.|||.|     ||        .||||||||.|||||||||||||||||||||||||||||.||||
Sbjct  369  CTTCGGAATCTTTGATGGGCACGGCGGCGAGACTGCAGCGGAATATGTAAAATCTCGACTCCCAGAGGCTCTTA  442

Query   62  AACAGCATCTTCAGGACTACGAGAAAGACAAAGAAAATAGTGTATTATCT----TACCAGACCATCCTTGAACA  131
            |.|||||.||||||||.||.|||||.|||||||||||.|||||    |||    ||||||||||||||.||.||
Sbjct  443  AGCAGCACCTTCAGGATTATGAGAAGGACAAAGAAAACAGTGT----TCTGACCTACCAGACCATCCTCGAGCA  512

Query  132  GCAGATTTTGTCAATTGACCGAGAAATGCTAGAAAAATTGACTGTATCCTATGATGAAGCAGGCACAACGTGTT  205
            ||||||.||||||||||||||.||||||||.|||||.|||||.||.||||||||||||||||||||||||||||
Sbjct  513  GCAGATCTTGTCAATTGACCGGGAAATGCTGGAAAAGTTGACAGTCTCCTATGATGAAGCAGGCACAACGTGTT  586

Query  206  TGATTGCTCTGCTATCAGATAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCGCGGGGTCCTGTGTGACAAA  279
            ||||.|||||.||.|||||||||||||||||.|||||||||||.||||||||.||.||.|||.|||||||||||
Sbjct  587  TGATCGCTCTACTCTCAGATAAAGACCTCACCGTGGCCAACGTTGGTGACTCTCGGGGAGTCTTGTGTGACAAA  660

Query  280  GATGGGAACGCTATTCCTTTGTCTCATGATCACAAGCCTTACCAGTTGAAGGAAAGAAAGAGGATAAAGAGAGC  353
            |||||.||.||.||.||.||||||||.||||||||||||||||||.||||||||||.|||||||||||||||||
Sbjct  661  GATGGCAATGCCATCCCCTTGTCTCACGATCACAAGCCTTACCAGCTGAAGGAAAGGAAGAGGATAAAGAGAGC  734

Query  354  AGGTGGTTTCATCAGTTTCAATGGCTCCTGGAGGGTCCAGGGAATCCTGGCCATGTCTCGGTCCCTGGGGGATT  427
            .|||||.||||||||.||.|||||||||||||||||||||||||||||.|||||||||||.||||||||.||.|
Sbjct  735  TGGTGGGTTCATCAGCTTTAATGGCTCCTGGAGGGTCCAGGGAATCCTAGCCATGTCTCGATCCCTGGGAGACT  808

Query  428  ATCCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCCTGACCTTTGACCTGGACAAGCTTCAGCCT  501
            ||||.|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||.
Sbjct  809  ATCCACTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCTTGACCTTTGACCTGGACAAGCTGCAGCCG  882

Query  502  GAGTTCATGATCTTGGCATCAGATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCAGTTCGATTCATCAAGGA  575
            |||||||||||||||||.||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  883  GAGTTCATGATCTTGGCCTCAGATGGCCTGTGGGATGCTTTCAGCAATGAAGAAGCGGTTCGATTCATCAAGGA  956

Query  576  GCGCTTGGATGAACCTCACTTTGGGGCCAAGAGCATAGTTTTACAGTCATTTTACAGAGGCTGCCCTGACAATA  649
            ||||||||||||.||.||||||||||||||.|||||.||..|.|||||.|||||||||||||||||||||||.|
Sbjct  957  GCGCTTGGATGAGCCCCACTTTGGGGCCAAAAGCATCGTCCTGCAGTCCTTTTACAGAGGCTGCCCTGACAACA  1030

Query  650  TAACAGTCATGGTGGTGAAGTTCAGAAATAGCAGCAAAACAGAAGAGCAG  699
            |.||.||||||||||||||||||||.|||||.|||||||||||||||||.
Sbjct 1031  TCACTGTCATGGTGGTGAAGTTCAGGAATAGTAGCAAAACAGAAGAGCAC  1080

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