Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13615
Subject:
NR_134868.2
Aligned Length:
4474
Identities:
695
Gaps:
3741

Alignment

Query    1  -------------------------ATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA  49
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA  74

Query   50  GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG  123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG  148

Query  124  CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA  197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA  222

Query  198  CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA  271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA  296

Query  272  TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC  345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC  370

Query  346  TCTGAGAGCA----------------------------------------------------------------  355
            ||||||||||                                                                
Sbjct  371  TCTGAGAGCAGTAGGTGACCCCTGGGACCCAGGGGAGGGGTTGGATGTGCAGTGTCACAAGAAATGGGTCTCCC  444

Query  356  ------------------------------AACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT  399
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACCAGCAGAAGAGAGGTGGGAAGACTCCAGAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT  518

Query  400  GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG  473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG  592

Query  474  GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGAG  547
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.| 
Sbjct  593  GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGCA-  665

Query  548  CAGC-AGCCT---CCTGCCCCAAGGCC------GACCGGCAC-----------------TGGCAG---CACTTT  591
             ||| |||||   .|||.||  |.|.|      |||||.|||                 ||.|||   ||||.|
Sbjct  666  -AGCGAGCCTGACGCTGTCC--ACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCACTGT  736

Query  592  CCTG---TTGAAGAA----ATCTTCCTGGCGTGTGGTTTCA-----AAGTG-----GCAGGG-----------C  637
            ||.|   .||.||||    .|||||||   .|||||   ||     ||.||     ||.|||           |
Sbjct  737  CCCGGCCGTGCAGAACCTGCTCTTCCT---CTGTGG---CAGCCGGAAATGAACCTGCTGGGTAGATGCACCCC  804

Query  638  TTGGGGCAGCACCAGG------CTGGGGCAG---------AGG----AGGAA-------------------AGC  673
            .||.|.|||| |||||      |.|.|||||         |||    |||.|                   | |
Sbjct  805  CTGAGACAGC-CCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGA-C  876

Query  674  AAGAGGAC---------------------------------------AGACCTCCAGAAGAGCAG--CGGAGGG  706
            ||| ||.|                                       ||.|||||.|.| |.|||  |.|||||
Sbjct  877  AAG-GGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGA-ATCAGCTCTGAGGG  948

Query  707  CGGGT-----------GAGG----ATTTCCCCATATACCAGTGTGTGTTCATCT-------------------A  746
            .|.||           ||||    |...||||||...||  ||..||||| |||                   |
Sbjct  949  GGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCC--TGCATGTTC-TCTGGTAGGAGGCAGAGAAAAGA  1019

Query  747  CCCA----------------------------------------------------------------------  750
            |||.                                                                      
Sbjct 1020  CCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGA  1093

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1094  CTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTG  1167

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1168  TGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCT  1241

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1242  GGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCAC  1315

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1316  TGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCT  1389

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1390  GTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTC  1463

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1464  CCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACC  1537

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1538  TGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCT  1611

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1612  CTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGC  1685

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1686  CGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCA  1759

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1760  GTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTC  1833

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1834  AGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGC  1907

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1908  CTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG  1981

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 1982  GCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAA  2055

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2056  AAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGG  2129

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2130  ATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGT  2203

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2204  GGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAG  2277

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2278  TTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAA  2351

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2352  TAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCG  2425

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2426  CCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTG  2499

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2500  CTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATT  2573

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2574  TTTTGAGATGGAGTTTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTG  2647

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2648  TCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCT  2721

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2722  GGCTAATTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA  2795

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2796  AGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTG  2869

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2870  TTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTC  2943

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 2944  CTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTAT  3017

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3018  TTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCC  3091

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3092  TCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCAC  3165

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3166  ACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGT  3239

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3240  GCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCC  3313

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3314  TCCCGAGTAACTGGGACTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTT  3387

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3388  TCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGG  3461

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3462  ACTACAGGCAAGCTCATGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGG  3535

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3536  CACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCG  3609

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3610  AGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGC  3683

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3684  GCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAG  3757

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3758  CTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAAT  3831

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3832  ATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCA  3905

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3906  CCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGA  3979

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 3980  CCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGC  4053

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 4054  TCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGA  4127

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 4128  GCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCT  4201

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 4202  GTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCT  4275

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 4276  CCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGC  4349

Query  751  --------------------------------------------------------------------------  750
                                                                                      
Sbjct 4350  AAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTAC  4423

Query  751  ----------------------------------  750
                                              
Sbjct 4424  CCATGAGGAATAAAACCATGCAGCAGCATGCAAA  4457

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