Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13646
Subject:
NR_102300.2
Aligned Length:
4759
Identities:
203
Gaps:
4534

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGTTCCGTCTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGGGCTCACACCCCGACATGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTTCAGGGGCCACATCTGGATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTATTAATATGCACGAAGTACG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGGAGTTTTGGTCTGTCATCCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAACAGGGCAAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAATTGAGAAAGACATTCATGGCTTCGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAGAAATCAAAGAGTTGGCTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCAGCTTGGATCAAGCTTTCATTTGCATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAATGGGAAGTACACATGAGAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAAATCTTTTGAATGTATACAGAGCTTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACTTAGAAGAGAAACAATGTAAATGTGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTTCATTCACAAAGCGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AATCACACCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTCGCATATAATTCATATCTGGCAAAACATACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAATG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGGCAAAGTTTTTAATCGACTATCAACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTGAAGAGTGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCTTACAAATGTGAAGAATGTTGCAAAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGAGGATTCATAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCAGAGGGATTCACACCTGGCACAACATCAGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCATCGCTTATA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATCCCTTGTATACCATCATAGGCTTCATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTGTGGCAAGACCTTCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATCACAATTCAACCCTGTAAGTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGCATAATGAATGTGGCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGGTTTTTAATCAAAAAGCAACCTTTGCACATCACCATAGACTTCATACTGGAGAGAAACCTTACAAATGGGAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAATGTGACAAAAGTTTTCAGTTGTAAATCAAACCTTAAAACACATAAGAAAATTCACATTGAAGAGAAACCAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ACAGAGGTAAGGTTTGTGACAAGGTTTTTGCATATAATGCATATCTGGCAAAACATACTAGAATTCACACTGGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAGAAACTCATTATAAGTGTAATGAGTGTGGCAAGACCGTTGGTCAAAATTCACACCTTGTAATTAAAAGGTCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAATTCACACCTTGTAATTCATAGTGGAGAGAAACCTTACAAGCACAATGAATGTGACATGGTTTTTAATCAAC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AATCACACCTTGCAAGTCATCATAGACTTCATACTGCATAGAAATCTTACAAACGTGAACAATGTGACAAAGTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTCATTCACAAATCCAGCTTCAAATACATAGGAGAATTCACACTGGAGAAAAGCCATAGAAATGTAAGGTTTGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GACAAGGCTTTCGGGAATGATTCACACGTGGCACCCCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAATGAGTGTGGCAAACCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATGGTATAGGGAAAC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TTGACTAATGTAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCACATCATTGGAGAATCCACAGT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GAAGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGACATCGTTCATGCCTTGCATTTCACTGGTGAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAA  3034

Query    1  ----------------------------------------ATGATTGTGGCAAAGCCTTTACTTCACATTCACA  34
                                                    ||||||||||||||||.|||||||||||||||||
Sbjct 3035  CATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACA  3108

Query   35  CCTCGTTGGACATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTC  108
            ||||.||.|||||||||||||||||.|||||||||||||||.||||||||||||||||||.|.|||||||||||
Sbjct 3109  CCTCATTAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGAAGGGTCTTCAGTC  3182

Query  109  CGAGGTCACTCCTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAA  182
            |.|||||||||||||||||.|||.|||.|||||.||||.||||.|..||||.|.||||||||||||||||||||
Sbjct 3183  CAAGGTCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCAGTGAGTATAGCAAA  3256

Query  183  CCATCAAGCATTAATTGACATTGGAGTCAATTCAGCATTGACT-------------------------------  225
            ||||||||||||||||||||||.|||||||.|||||.|||||.                               
Sbjct 3257  CCATCAAGCATTAATTGACATTAGAGTCAAATCAGCCTTGACCTGAGTTTGTTGATTTAACATTGATTTCAAGC  3330

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3331  ATTAATTGCCATTAAACTGTTTATGTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCAC  3404

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3405  TTTGAGAGGCAAAGACAGGTAGGTCACTGGAGCTCACGAGTTTGAGAACAGCCTAGCCAACAGATGGGAGCTAC  3478

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3479  TTTTCCCAGCCTTTATTTTCTTTTTCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAGT  3552

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3553  GCAGTGGCACGATCTCAGCTCACTGCAACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCAA  3626

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3627  GTAGCTGACACTACAGTTGTGTGCCACCACACCTGGGTAATTTTTTGTGTTTTTAGTAGAGACTGGGTTTCACC  3700

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3701  GTGTTAGCCAGAATGGTCTCTATCTTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAGATTAC  3774

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3775  AGGAGTGAGCCACTGTGCCTGGCCTGTTTTTTGTTTCTTTAACAAAAAGTTATAGAGACTTCTATGAGTATTGT  3848

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3849  ACCGAATCTAAATCACAATTGAGTATATAATCATTGAGCGATATTCATTTTTCCAATCAGTATGGGATTTATAT  3922

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3923  CTATTTATACATGTTTTTAATCATTTTGATCAATGTTTATAGATTTCAAGGTACAAACCTCACTTTTTATGTTT  3996

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3997  ATTCCTAAATATTTCTTACTTTAAGTTCTTTAGCAAATGGAATTGGTTTTTAATTTTCTTTTAAAATTATTTAT  4070

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4071  TGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTGTTATTCTATTCTGCAAATAAACTGAATGTGTTTGTTA  4144

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4145  GTTCCAGTTGCATTTTGGCTGACTCTTTGTGATTTTCTTTACAGAAGGTCATGTCATCTACAAACAAATAAAAT  4218

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4219  TTGACTTCTTTCTTTCTGATTTGGATGAGTTTGATTTCTTTTGCTATTTCATTGTTCTGGCTAGGACAGCCAGT  4292

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4293  ATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCCTACAGGAAAAGCATTCCGTTTTCCCT  4366

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4367  GATTGGTTATTTCTGCTGTGGTCATTTCATGGATGGTCTTTGTATTGCTGAGGTAAATTTTCTTCTGTATCTAT  4440

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4441  TTTGTGTGGGATTTCTATGATGACTTGATGTTGACTTTTGTGAAATGCTTTTTCTCCATGTATTGAGATGATGT  4514

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4515  GGTTTTCATCTTTCATTGTGTTCAAGTGGTATATCACATTGATTTGCTTGACTATGTTGAACCATCCTTGCATC  4588

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4589  CCAGAAATAAGTGGCACTTGCATATCTACAATCCTTTTAATATCCTCTTGAATACAGTTCGCTAGTACAAGGGG  4662

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4663  TCTTCAAGAAGTTCATGAAAAAAATACATATTATGTGAAAATTGCACATGATGTCACATTTTCTGCACCAAAAT  4736

Query  226  -----------------------  225
                                   
Sbjct 4737  AAACTGGCACAAATCTGTTATAA  4759

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