Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13667
Subject:
NR_003578.1
Aligned Length:
3040
Identities:
79
Gaps:
2957

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTTAGCGTAAACCGGGAAGCGGATCGCGTGGAGTGAAAGTCACCGCAGCGGAGATGGACAAACCATGTGGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCCTCCAGGTGTGTGCGACCATGAAATGGGAGACTAGCAGGACCCACGTTGGCCAACCGTGGACCTGGTCCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGTAGGAGTCGTGAGCCAGCTGAATTTGAATGCAAAGATGGAGCAAGGGCCGACTGGAGTCACACTGACATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCCCCATAACATGGGGACAGATCAAGAAAACAAAGCAGGAAGCTGAGAAAATGCTGGAGCATCCATGTGCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCATGTTAGCAGTAGTGTCCTGTGAGGATTGATTTCCAAAAACTCCTGTTACATGAGGAAGACACCAAGAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCAAAGAAAAGGAGCCAGGGTGGCTCTTCCTCAGCTATCTCTTCCAAATGCATGACAAGGAAGTTCTCATCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGGCAAGGCAATACAGAAGTGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACACTGGAGATTTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTTCCAGGAAATTGAGAAAGATTTTCAGGACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATGGCCATGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCACTCATGACAGAGATAAAAAAGTTGACAGGTAATACAGACTGATATGATCAAAGGCATGCTGGAAACAAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTATTAAAGATCAGCTTGGATCAAGCTTTCATTCACATCTGCCTGAACTGCATATATTGCAGAGCAAAGGGAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTGATAGTCAAGATGAGAAGTCTGTCAATGATGCTTCCTCAGTTTCAGCATCCCAAAGAATTTCTTGTATTCC  814

Query    1  -----------------------ATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAAGTA  51
                                   ||||||||||||.||||||                         |||||.|
Sbjct  815  TAAAACCCATATTTCTAATAAGTATGGGAATAATTTCCTCCA-------------------------GGAAGCA  863

Query   52  CACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAATCCTTTAATTATAGC-----------------  108
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||.||||                 
Sbjct  864  CACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTGTTAAAAAAATG  937

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct  938  TCAGATAATCCATTTAGGAGAGAAAAAATATAAATGTGATATATGTGGCAAGGTCTTTAATCAGAAGCGATACC  1011

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1012  TTGCATACCATCATAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATCAGTGTGGCAAGACCTTCAGTTAC  1085

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1086  AAGTCATCCCTTGTAATTCACAAGGCAATTCATACTGGAGAGAAACCTCACAAGTGTAATGAATGTGGCAAGGT  1159

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1160  TTTTAATCAAAAAGCATATCTTGCAAGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAAT  1233

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1234  GTGACAAAGTTTTTAGTCGCTAATCACACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCGTACAAA  1307

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1308  TGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATATTGTAATTCACACTGGAGAGAA  1381

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1382  ACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATA  1455

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1456  CTGGAGAGAAATGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCAT  1529

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1530  AGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATTGAAAATCAAACCTTGA  1603

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1604  ACATCATCATAGAGTTCATATCGGAGAAAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAATTTCAATT  1677

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1678  CACGCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATAGAAATGTAAGGTTTGTGACAAGGCATTC  1751

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1752  GGGTGTGATTCACACCTGGCACAACATACTAGAATTCACACTGGAGAGAAACCGTGCAAGTGTGATGAGTGTGA  1825

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1826  CAGAGCCTTCAGTGGTCAGTCAACACTTATTCACCATCAAGCAATCCATGTCATAGGGAAACTTTACTAATGTA  1899

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1900  ATGATTGTCACAAAGTCCTCAGTAATGCTACAACCATTGCAAATTATTGGAGAATGCATAATGAAGTGAGAACT  1973

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 1974  TACAAGTGTTATAAATGTGGCAAATTTTTCAGACTTCGTTCATACCTTGCAGTTTATCAGCGAACTCATACTGG  2047

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2048  AGAGAAACCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTATGCAAAACACAGGTGAA  2121

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2122  TTCATACAAGAAAGAAACCTCACAAGGGTGATGATTGTGTCAAAGCCTTTATTTCAGGTTCATGCCTCATTACA  2195

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2196  CATCAGAGAATCCATACTAGACAGAGATCTTACAAAAGTCATATGTGTGGCAAGATCTTTAGTCTGAGGTCACT  2269

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2270  CCTTGCAGGACATCAGGAAATTCATTTTTGAGGTAATAATTTCAAATGCAATGAGTATAGCAAACCATCAAGCA  2343

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2344  CAATTGATGTTAGATTCAAATCAGCATTGAGTTCAGTTTGAGTTGACTTAACATTGAGTTCAAGTATTTGTTGA  2417

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2418  GATTAAAGTGTTTATGTTAAGAGGATTAGGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGG  2491

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2492  CCAAGACAGGTAGATCACTTGAGATCAGGAGTTTGAGAGCAGCCTGGCCAACAGAGGTGAGCACCTTTCCCAGT  2565

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2566  CTGTTTTTTGTTTCTTCAACAAAAACTGATAGAGATTTTTATGGGTATTGTGTTGAATCAAAATCACATTGGGT  2639

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2640  TATGTAATCATTTAACAGTATTAATTTTTCCAAAACATCAATATGGGTTATATCTTTATATATGTTTTTAATCA  2713

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2714  TTTTGATCAATGTTTGTAGATTTCAATGTATGAATTTCTCACTTCTTTCCATTTATTCCTATTTCTTACTTTAA  2787

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2788  GTTCTCTAGCAAATGGAAGTGTTTTTAAATTTTCATTTAAAATTGTTTATTGTTAATGTATGAAAATTCAACGA  2861

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2862  ATTTTTGGTGCTGATATTGTATTGTGCAAATCTACTGATGTGTTTATTAGTCACAGTAGTATTTTGGTTGACTC  2935

Query  109  --------------------------------------------------------------------------  108
                                                                                      
Sbjct 2936  TTTGTGATTTTCTACACAGAAGATCATGTCATCTACAAAAAATATAATTTTACTTTTTCTGAAAAAAAAAAAAA  3009

Query  109  ------  108
                  
Sbjct 3010  AAAAAA  3015

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