Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13667
- Subject:
- XR_001753717.2
- Aligned Length:
- 3542
- Identities:
- 95
- Gaps:
- 3435
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG 666
Query 1 -------------------------ATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAAG 49
||.|||||||||.||||||.||||||||||.||.||||||| .||||||
Sbjct 667 CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAA-CGGGAAG 739
Query 50 TACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAATCCTTTAATTATAGC--------------- 108
||||||..||||||||||||||||||.|||||||||||||||||.||||||||..||||
Sbjct 740 TACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAA 813
Query 109 -------------------------------------------------------------------------- 108
Sbjct 814 CATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATA 887
Query 109 -------------------------------------------------------------------------- 108
Sbjct 888 CCTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACA 961
Query 109 -------------------------------------------------------------------------- 108
Sbjct 962 ATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTT 1035
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1036 TTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATG 1109
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1110 TGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAAT 1183
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1184 GTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAA 1257
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1258 CCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATAC 1331
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1332 TGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTA 1405
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1406 GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAA 1479
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1480 CGTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAAC 1553
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1554 CTTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAATT 1627
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1628 TCAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAG 1701
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1702 GATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATGA 1775
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1776 GTGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACT 1849
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1850 AATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAGGA 1923
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1924 GGTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTAT 1997
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1998 ACAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAACGGGA 2071
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2072 GAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCACAT 2145
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2146 TAGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAGGT 2219
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2220 TACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGATTGATTTCCAAAGACTCATGCTATGTAAGGAAGCCA 2293
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2294 CCAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACACTAGACTTTCAGGGATGTGGCTATA 2367
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2368 GATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACAGGGAAGTGATGTTGGAGAA 2441
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2442 CTACAGGAACCTGGAGTTTGTGGGCTTGAGTGCAAGCCACGATCTCGCCTCACCACAACCTCCGTCTCCCGAGT 2515
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2516 TCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTATGAACCACTATGCCCGGCTAACTTT 2589
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2590 GTTTTTTTTTTTTAGAAATTAAACCTTTTTTCAGCTTAATGACCCAGGGGTGTATTTTTGAAGGACTTGGGAGC 2663
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2664 TCTCTTTGAAAGGCAAACAACAAGGGAAACAGTACCTTTATCTCAGTAGGAAATTAAATAATTCAAACATCAAA 2737
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2738 TAACTTCAATTTAAGGCTATGGACTTTGAGATAATTCTGAGCCTTGAGAGGAATGTGGTCAGGCAACCTGAGTC 2811
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2812 CAGTGGAATGCAGGTGCAACTTCTAAGAGTTTTCCTGTAAGTAATTAAGAAGACTAAGTAGCCCCAGAGATAAG 2885
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2886 ACCTCCTCGGATCATTGTCCCTTCTTATGTAGTGATAAAGTAACCTTCCTTGAAGTGTATCTATCCGTAATCAA 2959
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2960 TCAAGTTGCTGCAGCCTATGCACTGGCCCAGAATAAAAAACGTGGTGATTCTGCTAAAGCTTCTCTGTCTTTCC 3033
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3034 CTGTGTGTGAAATCTTAACGTCTCTACTTGGGAACGCTGATCCCATTCATTTAGAGTTGATGTTTCCACGTGGC 3107
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3108 TATTTCCAAGCTTTGCCTTCAAATAAATTCTGTACTTAATCATATATTCTAAATTTTATTATTTACTGCTGACA 3181
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3182 TCAGTTTCTGTCGGATTGTAGGAGCCTCACCAGAGAGGGCCCCTGTCGCCATGTTGTAAAACTCACACTTGCCA 3255
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3256 AAAGTTGTGGGTTAGGGTTTCTCCCCCTCCCTCAGGATGACGCTAGTTAGCTGACACAGATGGTCACCTCCATT 3329
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3330 ACCAAGTAGAGTCAGGATGAACTATGTGTGACTGTTCAACTATGTGTCCTCTTCCCTGAGGACTGATTAGTGTT 3403
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3404 TATCTTGAAAACATGTCCTTAATGGGTTGTATAGAACACTGAAGCATCTGATTTCAAACTCTTAGCTCTTTTCC 3477
Query 109 ---------------------------------------------------------------- 108
Sbjct 3478 TCTATTTCCCATCACATTCTGGTCTAAGGCTTATTTATTAATAAAATGATTTTTATTTCTTTAT 3541