Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13667
- Subject:
- XR_935832.3
- Aligned Length:
- 4229
- Identities:
- 96
- Gaps:
- 4122
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGATTAACGCAAACCCGGAAGCGGATCGGGTGGAGTGAAGGTCACGTCGCCATGGATTGATTTCTAAAGACTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTTACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGATATCTCTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACACATGATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACATCAAAGTTATCACATTGGAGACTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCAAGAAGATGAAAGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTTGACTGGTAGCACAGACCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATGATCACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCCACATATTTCAGATCAAAGGTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTTT 518
Query 1 ---------------------------------------------------ATGGGAATAATTCCCTCCATTCT 23
|||||||||||.||||..|||||
Sbjct 519 CAACATCCCAAAGAATTTCCTGTAGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTCT 592
Query 24 TCATTACCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAATCCT 97
|||||||.|..||||||| ..|||||||||||||||||||||||||||||.|||||||||||||||||||.|||
Sbjct 593 TCATTACTCCCACAAAAA-CAGGAAGTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCCT 665
Query 98 TTAATTATAGC--------------------------------------------------------------- 108
||||||.||||
Sbjct 666 TTAATTGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGT 739
Query 109 -------------------------------------------------------------------------- 108
Sbjct 740 GGCAAGCTCTTTAATCACAAGCAATACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGTG 813
Query 109 -------------------------------------------------------------------------- 108
Sbjct 814 TAAAGAGTGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAAC 887
Query 109 -------------------------------------------------------------------------- 108
Sbjct 888 CTTACAAGTGTAATGAGTGTGGCAAGGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACT 961
Query 109 -------------------------------------------------------------------------- 108
Sbjct 962 GGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAAG 1035
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1036 ACTTCATACTGGAGTGAAACCTTACAAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAA 1109
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1110 ACCATACTAGAATTCATAGTGGAGAGAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCA 1183
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1184 AGCCTTGCACGTCATCATATACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAG 1257
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1258 TCAGAAATCAACCCTTGAGAGACATAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATA 1331
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1332 CAGCTTTCACGTGTAATTCACAGCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAAT 1405
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1406 GAGTGTCGCAAGACCTTCAGCCGCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTA 1479
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1480 CAAGTGTAATCAGTGTGGCAATACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAG 1553
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1554 AGAAATCTTACAAATGTACGGTTTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATT 1627
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1628 CACACTGCAAAGAAACCTTACAAGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTCA 1701
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1702 TCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCTC 1775
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1776 TTGAGTCACATAAGAGAATTCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTGG 1849
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1850 AATTCACAGCTGGCACGACATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGAC 1923
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1924 CTTCAGTTACAAGTCATCACTTGTATGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTTT 1997
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1998 GTGACAAGGCTTTCGTGTGTCGTTCCTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAAG 2071
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2072 TGTAATGAGTGCAGCAAGACCTTCAGTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGAA 2145
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2146 ACCTTACAAGTGTAGTGAGTGCAGCAAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCATA 2219
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2220 GTGGTGAGAAACCTTACAAGTGTAACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCGT 2293
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2294 AGACTTCATACTGGAGAGAAATCTTACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGC 2367
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2368 AAGACATATTAGAATTCACACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAAT 2441
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2442 CACACCTTTCACGTCATCATAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTC 2515
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2516 AGTCGCAAATCACACCTTAAAAGACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGG 2589
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2590 CAAAGCCTTTAGTGACCGGTCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAATATA 2663
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2664 ATGATTGTCACAAAGTCTTCAGTAACACTACAACAATTGCAAATCATTGGAGAATCCATGATGAAGAGAAATCT 2737
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2738 TCTGAGTGTAATAAATGTGGCATGTTTTTCAGACATTGTTCATACATTGCAGTTCATTGGCAACCTCATACTGG 2811
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2812 AGAGAAACCTTACAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACAGGAGAATT 2885
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2886 CATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACA 2959
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2960 TCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCC 3033
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3034 TTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGCTTTTCAGTAAGTGGTATGCCTGGG 3107
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3108 AAACATGGTGAGACCCCCGTTTCTGCAAAAAATACAAAAATTAGCTGGGAATGATGGCACATGCCTGCAGTATC 3181
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3182 AACTACTGTGGAGTCTGCAGTGGGAGGATGGCTTGAGCCTGGGAGGTCAAGACTATAGTGAGCTGTAATCATGC 3255
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3256 TACTGCACTCCAGCATGGTTGACAGAGCAAGATGCTGTCTAAAAAAGAATACTTATTGTAAAGTTTGGGTACAG 3329
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3330 GAATAATGAAGTCATTGATAGTTTATGAACAGGCTATGGAGTTGATGCCCAAAAGAAATAAACAGTTTGTAAAT 3403
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3404 GAATAACTTATTTTGAGTTGTGACAAGACAATGTTGAAAGTGATGCATGAAGCGGCAGGCAGACCATCCACATC 3477
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3478 AGTTTTACAGAAAAAAAGTTAATCTTGTTCGTGCTGCAGTGAAGAGAACAGCAAACAGGAGAAACAATAGTCAG 3551
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3552 GAATTCAATAATAGCCTGGTTAACATGATGAAACCCCGTCTCTACTAAAAATACAAAGATTAGCTGGGCACAGT 3625
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3626 GGTGGGCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTTT 3699
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3700 CGATGAGCCGGGATCCTGCCGTTGCACTCCAGCCTGGGCAACAAGAGCAAACCTCTGTCTAAAACAAACAAACA 3773
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3774 AAAAGGTCTAGCCCCCTCTCCTCCTTTGTCTGCCATCATGGTGTGTGCTTGACTCCACTTCTTGTCATGTCTTC 3847
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3848 TCACAAGACTTTCAGGATTAAGCGGTTTCTGGCCAACAACCAAAAGTAAAATCGTCCGATTTCCCAGTGGATTC 3921
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3922 GAATGAAAACTGGCAATAAAATCAGGTCCAACTTTAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAA 3995
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3996 GGAATTGCACGTGAGATGGCACACATATTTATGCTGTGTGAGCATCATAATCACGTTACTTAAGCTGAAAATGT 4069
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4070 CACTACCATCTGGAGACTTGGACATGTTTTATTGGGAATATATTTTTTTCTCTCTGAATCTGTTATGAACGCAT 4143
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4144 TGGTTGGGTGGGTTCAGTAATAAACATGTGAGACCTTTCATTTCAAAAAAAAAATTTTAATGACATAATAGATT 4217
Query 109 ----------- 108
Sbjct 4218 ACCTAAATTTC 4228