Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13723
Subject:
XM_011545352.2
Aligned Length:
2584
Identities:
1248
Gaps:
1292

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTCATCAAGTCCTAGCTCAACTGCTGGATACTTTGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTC  222

Query    1  -------ATGCAG-CGGCC--GCTG----------------------AGGGTGGCG-------CAGGGGCCCCG  35
                   |||||| .||||  ||||                      ||||    |       |||.|.||..|
Sbjct  223  ACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGG----GATTACTTCAGTGACCAAG  292

Query   36  GCCAGCCCGGGGCTGCAGCAGTGCGGACAGCTCCAGAAGCTCATCG--GCATCTCCAT----------TGGCA-  96
            .||  |.||.|.|.| |.|||      |||||..|.|||| ||| |  |||.||||||          ||..| 
Sbjct  293  ACC--CACGTGTCAG-AACAG------CAGCTATAAAAGC-CAT-GTTGCAGCTCCATGAAAGAGGACTGAAAT  355

Query   97  -----------------------GCCTG-------CGCGGGCTGGGCAC------CAAGTGCGCTGT------G  128
                                   |||||       |.|  .|||...||      |||||||||.||      |
Sbjct  356  TACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--TCTGATGACTATGAACAAGTGCGCAGTGCTGCAG  427

Query  129  TCCAAC--------GACCTCACCGAGCAGGAGATACGGACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAATG  193
            ||||.|        |.|.|||...|||        ...|.|||| .||||||||||||||||||||||||||||
Sbjct  428  TCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATG  493

Query  194  AAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCAT  267
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|
Sbjct  494  AAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCGT  567

Query  268  GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA  341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  568  GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA  641

Query  342  GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTT  415
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  642  GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTT  715

Query  416  CCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA  489
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  716  CCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA  789

Query  490  GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  790  GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT  863

Query  564  CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  864  CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG  937

Query  638  AAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT  711
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  938  AAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT  1011

Query  712  CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG  785
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1012  CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG  1085

Query  786  CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC  859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086  CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC  1159

Query  860  CTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTG  933
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160  CTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTG  1233

Query  934  GTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGC  1007
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234  GTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGC  1307

Query 1008  AGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTCTCAGATCACACCGTCA  1081
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||
Sbjct 1308  AGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAGATCACACCTTCA  1381

Query 1082  GGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTG  1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382  GGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTG  1455

Query 1156  TCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAG  1229
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1456  TCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAAG  1529

Query 1230  AGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATC-------------  1290
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct 1530  AGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGGATCTGCAAA  1603

Query 1291  --------------------------------------------------------------------------  1290
                                                                                      
Sbjct 1604  GACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTCAACTACTT  1677

Query 1291  -------AGGCCTTGCAGGAAAAGTCGTGGAATG----------------------------------------  1317
                   ||||||||||||||||||.||||||||                                        
Sbjct 1678  CTCATCAAGGCCTTGCAGGAAAAGTTGTGGAATGTAGCTGCCCCTTTGTATTTGAAGCAGAGTGATTTGGCCTC  1751

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1752  AGCAGCAGCGAAACAGATTATGGAAGAGACCTACAAAATGGAATTCATGTACAGTGGTGTGGAGAATAAGCAGG  1825

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1826  TGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTTGCAACTTATAGTAACAGCACGAACTACACGAGGA  1899

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1900  CTTGACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGTATTTCATCGCTGA  1973

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1974  TTTGCCCCACTTGCAGGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCGACTCATGACATCCAAACCTG  2047

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2048  CAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATCTCCCGCTTCCAGAGCAGATC  2121

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2122  CACAAAGCCTCAGCCACCATCATCGAGCCAGCGGGCGAGTCAGACAACCCTTTGCGGTTTACCTCTGGGTTGGT  2195

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2196  GGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACACTGTTAAGGTCCAGGTCTTAT  2269

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2270  ATCCAGATGGCCAGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGGCCCAGGGCGGCACCGG  2343

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2344  CTCATCACTCAGGTTTATCTCTCCCACACCGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCTGCTGCTGGC  2417

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2418  CTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACCA  2491

Query 1318  --------------------------------------------------------------------  1317
                                                                                
Sbjct 2492  GCATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAACCTGCACGGCGC  2559

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