Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13723
- Subject:
- XM_011545353.3
- Aligned Length:
- 1974
- Identities:
- 835
- Gaps:
- 1098
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTT 518
Query 1 -----------------------------------------ATGCAG-CGGCC--GCTG--------------- 15
|||||| .|||| ||||
Sbjct 519 ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGA 592
Query 16 -------AGGGTGGCG-------CAGGGGCCCCGGCCAGCCCGGGGCTGCAGCAGTGCGGACAGCTCCAGAAGC 75
|||| | |||.|.||..|.|| |.||.|.|.| |.||| |||||..|.||||
Sbjct 593 AGATTATAGGG----GATTACTTCAGTGACCAAGACC--CACGTGTCAG-AACAG------CAGCTATAAAAGC 653
Query 76 TCATCG--GCATCTCCAT----------TGGCA------------------------GCCTG-------CGCGG 106
||| | |||.|||||| ||..| ||||| |.|
Sbjct 654 -CAT-GTTGCAGCTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTC-- 723
Query 107 GCTGGGCAC------CAAGTGCGCTGT------GTCCAAC--------GACCTCACCGAGCAGGAGATACGGAC 160
.|||...|| |||||||||.|| |||||.| |.|.|||...||| ...|.
Sbjct 724 TCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTAT 789
Query 161 CCTG-GAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTG 233
|||| .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 790 CCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTG 863
Query 234 TCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCA 307
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 864 TCACATGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCA 937
Query 308 GTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAG 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 GTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAG 1011
Query 382 CGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGA 455
|||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1012 CGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGA 1085
Query 456 AGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGA 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 AGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGA 1159
Query 530 TGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAG 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 TGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAG 1233
Query 604 TGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAG 677
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1234 TGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAG 1307
Query 678 AAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCCA 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1308 AAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCA 1381
Query 752 GAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCA 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 GAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCA 1455
Query 826 TTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| .||||
Sbjct 1456 TTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAA---ATTGA------- 1519
Query 900 GGGA-AGT-CGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACAC 971
||| ||| |||| ||
Sbjct 1520 -GGATAGTACGGC--CC--------------------------------------------------------- 1533
Query 972 AGCTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTC 1045
Sbjct 1534 -------------------------------------------------------------------------- 1533
Query 1046 CAACAATGCGAGCATTGTTCTCAGATCACACCGTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTT 1119
Sbjct 1534 -------------------------------------------------------------------------- 1533
Query 1120 GTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGA 1193
Sbjct 1534 -------------------------------------------------------------------------- 1533
Query 1194 TCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCC 1267
Sbjct 1534 -------------------------------------------------------------------------- 1533
Query 1268 AGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGGAAAAGTCGTGGAATG 1317
Sbjct 1534 -------------------------------------------------- 1533
