Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13737
- Subject:
- NM_001294332.1
- Aligned Length:
- 1868
- Identities:
- 386
- Gaps:
- 1444
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGT 74
Query 1 --------------------------------------ATGG----AGGAGGACAACTG---------GAGGTG 23
|||| |.||||.||.||| .||.|.
Sbjct 75 GTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATT 148
Query 24 GCATTTCT----------------------ATGA--------CACCGT--------------GAAGGGC----- 48
.||||||| |||| || || ||.||||
Sbjct 149 CCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCA--GTGGTGGTAGGCGCTGGAGGGGCAGGCT 220
Query 49 TCCGA------------CTGGCTGGGGGACCAGGATGCCATCCACTACGTG--ACGGAG-----------CAGG 97
|.||| ||..|||.|| ||||.|...||.||..|.||| ||..|| ||||
Sbjct 221 TGCGAGCTGCATTTGGCCTTTCTGAGG---CAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGG 291
Query 98 -CCCCCACTGCCATGGTCG------AGGTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGAT 164
|.|.|||| ||.| ||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 TCACACACT------GTTGCAGCACAGCTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGAT 359
Query 165 TTATCAGCGTGCATTTGGCGGACACAGCCTCAAGTTTGGAAAGGGCAGGCAGGCCCATCGGTGCTGCTGTGTGG 238
||||||||||||||||||.|||||.|||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 360 TTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGG 433
Query 239 CTGATCGGACCGGCCACTCAATATTGCACACCTTATATGGGAGGTCTCTGCGATATGATACCAGCTGTTTTGTG 312
||||||||||.||||||||..|||||||||||||||||||.|||||||||||||||||||||||||.|||||||
Sbjct 434 CTGATCGGACTGGCCACTCGCTATTGCACACCTTATATGGAAGGTCTCTGCGATATGATACCAGCTATTTTGTG 507
Query 313 GAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGG 386
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||
Sbjct 508 GAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGG 581
Query 387 GTCCATCCATCGCATAAGAGCAAAGAATACTATTGTTGCCACAGGGTACTTGGGAGGC---------------- 444
|||||||||||||||||||||||||||.|||.||||||||||| ||||||
Sbjct 582 GTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACA---------GGAGGCTACGGGCGCACCTACT 646
Query 445 -------------------------------------------------------------------------- 444
Sbjct 647 TCAGCTGCACGTCTGCCCACACCAGCACTGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAG 720
Query 445 -------------------------------------------------------------------------- 444
Sbjct 721 GACCTAGAGTTTGTTCAGTTCCACCCTACAGGCATATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGG 794
Query 445 -------------------------------------------------------------------------- 444
Sbjct 795 AGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGG 868
Query 445 -------------------------------------------------------------------------- 444
Sbjct 869 CGTCTAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCCGAGAAGGAAGAGGCTGTGGCCCTGAGAAAGAT 942
Query 445 -------------------------------------------------------------------------- 444
Sbjct 943 CACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCACGCGCCTGCCTGGCATTTCAGAGACAGC 1016
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1017 CATGATCTTCGCTGGCGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCG 1090
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1091 GCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGCCTGTAC 1164
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1165 GCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGT 1238
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1239 TGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGAGATAAAGTCCCTCCAATTAAAC 1312
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1313 CAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGATGGAAGCATAAGAACATCGGAA 1386
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1387 CTGCGACTCAGCATGCAGAAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGG 1460
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1461 TTGTGGGAAAATCAGCAAGCTCTATGGAGACCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACA 1534
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1535 CGGACCTGGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCA 1608
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1609 CGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCC 1682
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1683 CATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTTGGCA 1756
Query 445 -------------------------------------------------------------------------- 444
Sbjct 1757 CTGGGAAGGTCACTCTGGAATATAGACCCGTGATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCG 1830
Query 445 ------------------ 444
Sbjct 1831 CCAGCCATTCGCTCCTAC 1848
