Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_13781
- Subject:
- XR_002956463.1
- Aligned Length:
- 3867
- Identities:
- 241
- Gaps:
- 3593
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTCCCAGCAGGATGCCCCGGCTCTGCAGGAAGCTGAAGTGAGAGGCCCGGAGAGGGCCCAGCCCGCCCGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGATGACCAAGGCCCGGCTGTTCCGGCTGTGGCTGGTGCTGGGGTCGGTGTTCATGATCCTGCTGATCATCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTACTGGGACAGCGCAGGCGCCGCGCACTTCTACTTGCACACGTCCTTCTCTAGGCCGCACACGGGGCCGCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCACGGCCGACTCCGATGTCGACGAGTTTCTGGACAAGTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCAGTGCTGGCGTGAAGCAGAGCGACCTTCCCAGAAAGGAGACGGAGCAGCCGCCTGCGCCGGGGAGCATGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGAGCGTGAGAGGCTACGACTGGTCCCCGCGCGACGCCCGGCGCAGCCCAGACCAGGGCCGGCAGCAGGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCGGAGGAGCGTGCTGCGGGGCTTCTGCGCCAACTCCAGCCTGGCCTTCCCCACCAAGGAGCGCGCATTCGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACATCCCCAACTCGGAGCTGAGCCACCTGATCGTGGACGACCGGCACGGGGCCATCTACTGCTACGTGCCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTGCTGAGCGGAAGCCTGCTGCACCGCGGTGCGCCCTACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGACCCGCTGCGCATCCCGCGCGAGCACGTGCACAACGCCAGCGCGCACCTGACCTTCAACAAGTTCTGGCGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTACGGGAAGCTCTCCCGCCACCTCATGAAGGTCAAGCTCAAGAAGTACACCAAGTTCCTCTTCGTGCGCGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCCTTCGTGCGCCTGATCTCCGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACCGCAAGTTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCGTGCCCATGCTGCGGCTGTACGCCAACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTGCTGGACCCGCACACGGAGAAGCTGGCGCCCTTCAACGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCAGATCGACTACGACTTCGTGGGGAAGCTGGAGACTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGACGAGGACGCCGCGCAGCTGCTGCAGCTACTCCAGGTGGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACAGGACCGCCAGCAGCTGGGAGGAGGACTGGTTCGCCAAGATCCCCCTGGCCTGGAGGCAGCAGCTGTATAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTCTACGAGGCCGACTTTGTTCTCTTCGGCTACCCCAAGCCCGAAAACCTCCTCCGAGACTGAAAGCTTTCGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTGCTTTTTCTCGCGTGCCTGGAACCTGACGCACGCGCACTCCAGTTTTTTTATGACCTACGATTTTGCAATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGCTTCTTGTTCACTCCACTGCCTCTATCCATTGAGTACTGTATCGATATTGTTTTTTAAGATTAATATATT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCAGAGGGTGTAGGAGTTGTGTTCCAAGTTTGTTCCTGCAAACCCTCCGATGAGGCCAGCTGCATTCATCGGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTGGATGGCCGCACCTCTCTCTCCCCGCCCTGTCTCCTGCACTCAGAGACGGAGTTTCACCATGTTAGCCAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGCTCTGGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAACTGCTGGGATTACAGGCATGAGACA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCACGCCCCGCCGAGTCCCTGCTTTTAATTCTTTGGGGCAGGGATCCCCAACCCCCTGGTGATGGACCAATACT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCCTGCGGCCCCTTAGGAACTGGACTGCACAGCAGGAGGTGAGCGGCAGATGGCATGGGAAAGTAGCACACAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCGGGACTCTGCAGCCGAGTTTGCCTCCTTGAATGCACACATAACACAGGAACAAAGACAGAGCTGCTTCCCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGTTGGGTCTCTGGCGGACAGTCAGTCTCATTTCCAGATGGGGAAAGGGAGACCCAGGCTGCGGTGACCCACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGCACAGGATCAGTGAGAACCCAGCCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTCGTGGGACCATTGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCCGTTGTGGCATCTGTCCCTGGCCTTGCCCCCATCCGTCTCTGCACAGCCCAGGTGGGTCCGAGCCAGCCCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGTCTCCAGGGTCCCAGCCCAGCCTCTAGAAGAGCCAGCAGCAGGGCTGGAAGGGAGAGCACATGCTGGGCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGGGCTGCCTTGGACCTCAGGCCGTTGACAAGGAAAAGCGGAGAGTTGGGAAAAAAGGACAAATAGCTGAGCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAGCCGCAGTCTGGGGGACGGGAGCCTCGTGCGACTCTCGGAGTGCTGGCCAGATTGGCAGAGGGGAGGAGAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGAAAAACCCAGGCTCTGAGGAAAAACCTCTCCAGCCCAGCGCGTGGCCTGGCATTAACCCACTGCAGCCCCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGAAGTGGTTCCACCCCAGGCAGCCAACAAGGCGGTGCCTGAACTATGTCTGTGGATGACGGAGCCACGACCTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCCTCAGGGCTCAGCGCTGCGGCTATGTCCAGGGACCCCTGGCTGTGCCCACGTCGGGGCTTCCCGTTCCTTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCTGCCATGAGAATGAGATGTCCAGGGACCTCCCTGCTCCAGCTGGGACCTGTGGGGCTTTGTCTGTTGTCCCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCACCTTGGAGATGTCATTTCTAACATTTTAACCCAGGAATCCCCCCACCAAGGGACAGAGTGCAAGGACATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATCGAACAGAAAAAGTTCTGGTACAAGATCAACCCCGTGGGGTGGTGAGTGCTGCAGCCCCGGGCCTCACATCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCCGTCCCTGTGGGAGATTGGAGCGGTCCCAGTGCCCACCGCTGATTCTCTGGCTCCAGCAACCCCTCCAGGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGATCCGTCCCACGCAGCCTGGCCTGAAACACTGCCCAGCCACTGGGTCCAGTAAGACAGAGCCTCGAGTCATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTGCCAAGAGGATCCAGAAACACAGACTTTTTCTGGGGTCCTGGAGGCTTCTGGCCCATGGGGAGCCCCTGGGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCCAGCGATCCAGCCCTGATGTGCTGAGGGTGCAGGGCCCAGCTGCAGAGCAGAGGAGAGTGGCCCCCAGGGAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAGCAGCACGAAAGGCACACTGAGGCACACTGGCAGGCCTGGGCTGCAGAGAGCCTGAAGGTCATGGGGTAGCT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGTGGAAGCAGGAAGACCCCATACAGCAGCGACCACTGAGGCTGGTGCTGCACTTTCTCAGGGAATTGAGTGTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GGCTCCCACCATCCCGGCCACTGGCTTCCTCCAAAGCCTCCTCCTCTTACATCAGCAAACCTTCTGTTCGGTGA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCCCCTCAGTGACCCTCTGTGCTTGCCTTCGTGGTCTTCCTCATGGAGGATTTCGGGTCAGCGTGGGGGTCAGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGTCATTTCCCATACCCCCTCAAAGGTACTTCTTGCTGTGGTCCCCACACTCTGACACCCTCTTCTGAAATGAA 3478
Query 1 ------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCA 50
|..|||||||||||||||.||||||||||||||||.||||.|.||||...
Sbjct 3479 CACTTTTTTGTTGTTGTTGTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTAG 3552
Query 51 CTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG-- 122
||||||||||||||..|.|.||||||||||||||||.||.||.||||||.|||.||||||||||||||||||
Sbjct 3553 CTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTTTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGC 3626
Query 123 --GTGCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTG-GGTTTTACCATATTGGCCAG 190
||| |||||| ||| |||||||||||||||||||||||||| || |||||.|||||.||||||||
Sbjct 3627 ATGTG-CCACCAAGCCCA------GCTAATTTTTGTATTTTTAGTAGAGA-TGAGGTTTCACCATGTTGGCCAG 3692
Query 191 ACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAG 264
.|||||||||||||.|||||||||.|||.|.||||.||||.|||.|||||||||||||||||||.|.|..||||
Sbjct 3693 GCTGGTCTCGAACTTCTGACCTCAAGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCATGAG 3766
Query 265 CCACTGCGCCTGGCCA-------TT------------------------------------------------- 282
||||||||||.||||| ||
Sbjct 3767 CCACTGCGCCCGGCCACAAACACTTTTTTTTTTTTAAACAAGTGAAAACAAGTTTATTAACAAAGTTAAGAAAT 3840
Query 283 ------------------- 282
Sbjct 3841 AAAGAATGGCTATTCCATA 3859
