Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
NM_025176.6
Aligned Length:
4154
Identities:
208
Gaps:
3940

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATGAAGAAGAGAACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCAGCTGCGACACCACGGGGACTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTTCTGGACCGCCAGGAGCTGACCCAGCTCTGCCTTAAGCTTCACCTGGAGCAGCAGCTGCCCGTCCTCCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACGCTTCTCGGAAACGACCATTTCGCCAGGGTTAACTTTGAGGAATTTAAGGAAGGTTTTGTGGCTGTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTTCAAATGCTGGTGTTCGCCCCTCAGATGAAGACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCCATCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCAAAGTATGTGAATGGTTCTAAGTGGTATGGCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGGAGAGTCCCAAGTCAGATGAAGAGGCCGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGAAGCACAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGCTGCAGACCTGGGATTCTGAGGACTTTGGGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACACCCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAGCCAGATCCGGGGCGTGTGGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTCTTCCACTCGGGTTAAACCGAGCAAGGCTTGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGCTTTTCCTGATCAGGTCCTGGCCATGTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGAGCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGGACTTCAGCGTGGACGAGAAGGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAGCAAGGGCAGGTGGAGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTTTGTGAAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGGGTACCGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAAGGCTGAGCCTCCTGCGGTCTGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCCGCGCTGGAGTGGGACGTGGGGCGCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGAAGCTGACCCTGGCCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGAAGGAAAACAGTCGCCTACAGAAGGAGATTGTGGAAGTGGTGGAAAAGCTTTCGGATTCGGAGAGGCTGGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGAAGCTGCAGAAGGACCTGGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGAGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGCAAGCTGAGCTGGAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCTGCTCCAGTGAGTATAGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AACGGAGCTGATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACTACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCAGGCTCGCAGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGCGAGGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGGAGGTCATCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGAGAGGCTGAGGCGGAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGGAGAGGGCACTGAAGCTGCAGCCCT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTTGGAGCTTGCCCGCGGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAAAGATGGGCTGGTGGCAGGAAGTGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGGAGCGGCCACTGGCCTGGCTGGCCCCAG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAGCCTGGAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCGAGCACGAAGCTGGAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAGC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAGATTTGAGAGAGAACGACAGACTGGAGT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTCTGAGAT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGCTCAATGTCAGGGTTCTTCAACTGG  3478

Query    1  --------------------------------------------------------ATGTTAACACAGAGCCTG  18
                                                                    ||||||||||||||||||
Sbjct 3479  GACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACCATTCAGATGTTAACACAGAGCCTG  3552

Query   19  GAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAA  92
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  GAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAA  3626

Query   93  TCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG-  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct 3627  TCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTGC  3700

Query  166  -GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA------------------CCTGG------  208
             ||   ||||      || |||| ||||||   ||.||||.||||                  .||||      
Sbjct 3701  AGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACTTGCAGGAGGTCCGGCTGGTGCCCC  3766

Query  209  --------------GAGCAGCATCACCG----------------------------------------------  222
                          ||||.|||||.||.                                              
Sbjct 3767  AGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACAG  3840

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3841  CGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGAGGCGGAGATGATTCTGAAGAATAT  3914

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3915  GGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAAAGAACACGAAGTCCGACCTGCTGC  3988

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3989  TGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCC  4062

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4063  GAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGC  4136

Query  223  ----------  222
                      
Sbjct 4137  CCTCTCTGTG  4146

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.