Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529187.2
Aligned Length:
4403
Identities:
208
Gaps:
4189

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGAAGAAACTGAAGAGGCCTCTGAACTGCGCAGCCTGCTATGGGATGGATGAAGAAGAGAACCACTATGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCGCAGCTCAGGGAAGTCTACAGCAGCTGCGACACCACGGGGACTGGCTTTCTGGACCGCCAGGAGCTGACCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCTCTGCCTTAAGCTTCACCTGGAGCAGCAGCTGCCCGTCCTCCTGCAGACGCTTCTCGGAAACGACCATTTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCAGGGTTAACTTTGAGGAATTTAAGGAAGGTTTTGTGGCTGTGTTGTCTTCAAATGCTGGTGTTCGCCCCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGATGAAGACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCCATCCCTCCAAAGTATGTGAATGGTTCTAAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGTATGGCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGCGTGGAGAGTCCCAAGTCAGATGAAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCCGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGAAGCACAAGGACAGCTGCAGACCTGGGATTCTGAGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACTTTGGGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACACCCCAGAGAGCCAGATCCGGGGCGTGTGGGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGGACTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAGAGTCTTCCACTCGGGTTAAACCGAGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAGGCTTGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTTCGCTTTTCCTGATCAGGTCCTGGCCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGAGCCTGGACTTCAGCGTGGACGAGAAGGTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AACCTTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGCCTGCTACCACCAGGAGCTGAGCTACCAGCAAGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAGGCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGCAGCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGGGTACCGGGAAAGGCTGAGCCTCCTGCGGTCTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGAAGCTGACCCTGGCCCTGAAGGAAAACAGTCGCCTACAGAAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GAGATTGTGGAAGTGGTGGAAAAGCTTTCGGATTCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGACCTGGAGTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGTGCTGAAGGACAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGGAATACGAGCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGCCTGTGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCGCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCCAGCAGGCATTTCATTCCTGGGTAATTCTGCTCCAGTGAGTATAGAAACGGAGCTGATGATGGAGCAGGTAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAAGGGAAATTGCGGCACTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AAAAGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAAGGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CGGCATCACAGCCACCTGCAGCAGATCAGGAGAGGAAGTGCCTGGTCATCGCAGACAGGCTGCTGCTCAGCTGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CACCCACTGTCCTGTGGAGAGCATTGGCCCCGGCTTAGAAGAGGACGGGCCCTCCCACCACACTGGCCAGGCCA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CCCCCAGCCTGACAGAAAGTCATCTTTCCGGCCGGATGCGGTGGCTCACACCTGTAATCAGCACTTTGGGAGGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAGGCGGGAGAGAGGCTGAGGCGGAGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGGAGAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAGGAGGAGTTGGAGCTTGCCCGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GAAAGATGGGCTGGTGGCAGGAAGTGGCCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGCGGCCACTGGCCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GCGCAGCGGGGCTGGAGCAGCCTGGAGCCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCAT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TCAGGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GAGAGAGAAGGATGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ATTTGAGAGAGAACGACAGACTGGAGTTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AGACAAGGAAAAGGCCTGCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AGCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTG  3774

Query    1  ---------ATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAA  65
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775  ACCATTCAGATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAA  3848

Query   66  ACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGA  139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849  ACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGA  3922

Query  140  CCCTTGAGGAAAGTCAAGACCAGGTG--GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA--  203
            ||||||||||||||||||||||||||  ||   ||||      || |||| ||||||   ||.||||.||||  
Sbjct 3923  CCCTTGAGGAAAGTCAAGACCAGGTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGC  3988

Query  204  ----------------CCTGG--------------------GAGCAGCATCACCG-------------------  222
                            .||||                    ||||.|||||.||.                   
Sbjct 3989  ACTTGCAGGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAG  4062

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4063  CAGGCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGA  4136

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4137  AGAGGCGGAGATGATTCTGAAGAATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTG  4210

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4211  AAAAGAACACGAAGTCCGACCTGCTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAG  4284

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4285  GCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAA  4358

Query  223  -------------------------------------  222
                                                 
Sbjct 4359  ACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTG  4395

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