Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529190.1
Aligned Length:
4169
Identities:
208
Gaps:
3955

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATGAAGAAGAGAACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCAGCTGCGACACCACGGGGACTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTTCTGGACCGCCAGGAGCTGACCCAGCTCTGCCTTAAGCTTCACCTGGAGCAGCAGCTGCCCGTCCTCCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACGCTTCTCGGAAACGACCATTTCGCCAGGGTTAACTTTGAGGAATTTAAGGAAGGTTTTGTGGCTGTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTTCAAATGCTGGTGTTCGCCCCTCAGATGAAGACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCCATCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCAAAGTATGTGAATGGTTCTAAGTGGTATGGCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGGAGAGTCCCAAGTCAGATGAAGAGGCCGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGAAGCACAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGCTGCAGACCTGGGATTCTGAGGACTTTGGGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACACCCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAGCCAGATCCGGGGCGTGTGGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTCTTCCACTCGGGTTAAACCGAGCAAGGCTTGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGCTTTTCCTGATCAGGTCCTGGCCATGTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGGCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTGCTTCCAGAGCCTGGACTTCAGCGTGGACGAGAAGGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGCAGGGGTACCGGGAAAGGCTGAGCCTCCTGCGGTCTGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCGCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGCTGACCCTGGCCCTGAAGGAAAACAGTCGCCTACAGAAGGAGATTGTGGAAGTGGTGGAAAAGCTTTCGGAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGACCTGGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAGTGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCCAGTGAGTATAGAAACGGAGCTGATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGACCAAGGTAAATTACTACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGGCTGAGGCGGAGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGGAGAGGGCAC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGCTTGCCCGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAAAGATGGGCT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGTGGCAGGAAGTGGCCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGGAGCGGCCACTGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGAGAGGTGGTCACG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGGAGCAGCCTGGAGCCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGGGCGCCCTGGAGC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAGATTTGAGAGAGA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ACGACAGACTGGAGTTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGACAAGGAAAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GGCCTGCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGCTCAATGTCA  3478

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |||
Sbjct 3479  GGGTTCTTCAACTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACCATTCAGATG  3552

Query    4  TTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGA  77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  TTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGA  3626

Query   78  ACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAA  151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627  ACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAA  3700

Query  152  GTCAAGACCAGGTG--GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA--------------  203
            ||||||||||||||  ||   ||||      || |||| ||||||   ||.||||.||||              
Sbjct 3701  GTCAAGACCAGGTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACTTGCAGGAGG  3766

Query  204  ----CCTGG--------------------GAGCAGCATCACCG-------------------------------  222
                .||||                    ||||.|||||.||.                               
Sbjct 3767  TCCGGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGG  3840

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3841  CGCCTGGATGCACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGAGGCGGAGAT  3914

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3915  GATTCTGAAGAATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAAAGAACACGA  3988

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3989  AGTCCGACCTGCTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAG  4062

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 4063  AAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAG  4136

Query  223  -------------------------  222
                                     
Sbjct 4137  GATTGCCCCCGCAGCCCTCTCTGTG  4161

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