Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529191.1
Aligned Length:
3893
Identities:
208
Gaps:
3679

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATGCCTGCAAGAGTGAAGAAAGGGGCCCCACAGAAAGGACAGCTGCAGACCTGGGATTCTGAGGACTTTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACACCCCAGAGAGCCAGATCCGGGGCGTGTGGGAAGAGCTGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGGAATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAGAGTCTTCCACTCGGGTTAAACCGAGCAAGGCTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCTGTGCTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTTCGCTTTTCCTGATCAGGTCCTGGCCATGTGGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCAGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGGCTTGCTGCTTCCAGAGCCTGGACTTCAGCGTGGACG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAAGGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAGCAAGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTTTGTGAAAGAGATGGACGACTGCCACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGGGTACCGGGAAAGGCTGAGCCTCCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGGTCTGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGTGGGGCGCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGAAGCTGACCCTGGCCCTGAAGGAAAACAGTCGCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TACAGAAGGAGATTGTGGAAGTGGTGGAAAAGCTTTCGGATTCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTGGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGTCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGACTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCTGCTCCAGTGAGTATAGAAACGGAGCTGATGATGGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAAGGGAAATTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGAGGAAGTGCCTGGTCATCGCAGACAGGCTGCTGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCAGCTGGCACCCACTGTCCTGTGGAGAGCATTGGCCCCGGCTTAGAAGAGGACGGGCCCTCCCACCACACTGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAGGCCACCCCCAGCCTGACAGAAAGTCATCTTTCCGGCCGGATGCGGTGGCTCACACCTGTAATCAGCACTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGGGAGGCCAAGGCGGGAGAGAGGCTGAGGCGGAGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCTGGAGCTGGAGAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCCTCGAGGAGGAGGAGTTGGAGCTTGCCCGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GCCCTGCCGAAAGATGGGCTGGTGGCAGGAAGTGGCCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTGTGGGGAGCGGCCACTGGCCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CGGCGCGAGCGCAGCGGGGCTGGAGCAGCCTGGAGCCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAGGCCATTCAGGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCGCTGGAGAGAGAGAAGGATGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ACATGTAGATTTGAGAGAGAACGACAGACTGGAGTTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTAAAGAAAGACAAGGAAAAGGCCTGCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ATTATCCCAGCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGC  3256

Query    1  -----------------ATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAA  57
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  ATCGTGTGACCATTCAGATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAA  3330

Query   58  ATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCT  131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  ATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCT  3404

Query  132  GACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG--GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCA  197
            ||||||||||||||||||||||||||||||||||  ||   ||||      || |||| ||||||   ||.|||
Sbjct 3405  GACCCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCA  3470

Query  198  GTCCCA------------------CCTGG--------------------GAGCAGCATCACCG-----------  222
            |.||||                  .||||                    ||||.|||||.||.           
Sbjct 3471  GGCCCAGCACTTGCAGGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTC  3544

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3545  AGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAG  3618

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3619  CGGGTGGAAGAGGCGGAGATGATTCTGAAGAATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGA  3692

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3693  GCAGTTTGAAAAGAACACGAAGTCCGACCTGCTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAG  3766

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3767  CACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCT  3840

Query  223  ---------------------------------------------  222
                                                         
Sbjct 3841  CTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTG  3885

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