Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529193.1
Aligned Length:
3122
Identities:
208
Gaps:
2908

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATGAAGAAGAGAACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCAGCTGCGACACCACGGGGACTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTTCTGGACCGCCAGGAGCTGACCCAGCTCTGCCTTAAGCTTCACCTGGAGCAGCAGCTGCCCGTCCTCCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACGCTTCTCGGAAACGACCATTTCGCCAGGGTTAACTTTGAGGAATTTAAGGAAGGTTTTGTGGCTGTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTTCAAATGCTGGTGTTCGCCCCTCAGATGAAGACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCCATCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCAAAGTATGTGAATGGTTCTAAGTGGTATGGCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGGAGAGTCCCAAGTCAGATGAAGAGGCCGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGAAGCACAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGCTGCAGACCTGGGATTCTGAGGACTTTGGGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACACCCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAGCCAGATCCGGGGCGTGTGGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTCTTCCACTCGGGTTAAACCGAGCAAGGCTTGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGCTTTTCCTGATCAGGTCCTGGCCATGTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGGCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTGCTTCCAGAGCCTGGACTTCAGCGTGGACGAGAAGGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGCAGGGGTACCGGGAAAGGCTGAGCCTCCTGCGGTCTGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCGCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGCTGACCCTGGCCCTGAAGGAAAACAGTCGCCTACAGAAGGAGATTGTGGAAGTGGTGGAAAAGCTTTCGGAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGACCTGGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAGTGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TCCAGTGAGTATAGAAACGGAGCTGATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGACCAAGGTAAATTACTACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGACTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGTTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTCTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGATGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGCTCAATGTCAGGGTTCTTCAA  2442

Query    1  ------------------------------------------------------------ATGTTAACACAGAG  14
                                                                        ||||||||||||||
Sbjct 2443  CTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACCATTCAGATGTTAACACAGAG  2516

Query   15  CCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCC  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  CCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCC  2590

Query   89  TGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAG  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  TGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAG  2664

Query  163  GTG--GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA------------------CCTGG--  208
            |||  ||   ||||      || |||| ||||||   ||.||||.||||                  .||||  
Sbjct 2665  GTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACTTGCAGGAGGTCCGGCTGGTG  2730

Query  209  ------------------GAGCAGCATCACCG------------------------------------------  222
                              ||||.|||||.||.                                          
Sbjct 2731  CCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGC  2804

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2805  ACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGAGGCGGAGATGATTCTGAAGA  2878

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2879  ATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAAAGAACACGAAGTCCGACCTG  2952

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2953  CTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGG  3026

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 3027  CGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCG  3100

Query  223  --------------  222
                          
Sbjct 3101  CAGCCCTCTCTGTG  3114

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