Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529194.2
Aligned Length:
3068
Identities:
208
Gaps:
2854

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGAGTTATGAGTAGGTTTCTGCATCTGGAGCAGGGGTACCGGGAAAGGCTGAGCCTCCTGCGGTCTGAGGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCAGGCTGAGGAGGCTGGCCTCCGCGAGAAGCTGACCCTGGCCCTGAAGGAAAACAGTCGCCTACAGAAGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTGTGGAAGTGGTGGAAAAGCTTTCGGATTCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGACCTGGAGTTTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGAAGGACAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATACGAGCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGCCTGTGGGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGCAGGCATTTCATTCCTGGGTAATTCTGCTCCAGTGAGTATAGAAACGGAGCTGATGATGGAGCAGGTAAAGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAAGGGAAATTGCGGCACTGAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCAGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACACAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATCACAGCCACCTGCAGCAGATCAGGAGAGGAAGTGCCTGGTCATCGCAGACAGGCTGCTGCTCAGCTGGCAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCACTGTCCTGTGGAGAGCATTGGCCCCGGCTTAGAAGAGGACGGGCCCTCCCACCACACTGGCCAGGCCACCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAGCCTGACAGAAAGTCATCTTTCCGGCCGGATGCGGTGGCTCACACCTGTAATCAGCACTTTGGGAGGCCAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCGGGAGAGAGGCTGAGGCGGAGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGGAGTTGGAGCTTGCCCGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGATGGGCTGGTGGCAGGAAGTGGCCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGGAGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCCACTGGCCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGAGAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGCGGGGCTGGAGCAGCCTGGAGCCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGGGCG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGAGAAGGATGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAGATT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGAGAGAGAACGACAGACTGGAGTTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CAAGGAAAAGGCCTGCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCAATGTCAGGGTTCTTCAACTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACC  2442

Query    1  ------ATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACT  68
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  ATTCAGATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACT  2516

Query   69  TAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCC  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCC  2590

Query  143  TTGAGGAAAGTCAAGACCAGGTG--GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA-----  203
            |||||||||||||||||||||||  ||   ||||      || |||| ||||||   ||.||||.||||     
Sbjct 2591  TTGAGGAAAGTCAAGACCAGGTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACT  2656

Query  204  -------------CCTGG--------------------GAGCAGCATCACCG----------------------  222
                         .||||                    ||||.|||||.||.                      
Sbjct 2657  TGCAGGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAG  2730

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2731  GCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGA  2804

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2805  GGCGGAGATGATTCTGAAGAATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAA  2878

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2879  AGAACACGAAGTCCGACCTGCTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCC  2952

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2953  ACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACT  3026

Query  223  ----------------------------------  222
                                              
Sbjct 3027  CGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTG  3060

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