Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529195.3
Aligned Length:
2897
Identities:
208
Gaps:
2683

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACTCATGGCCTTTCTGAGCACAGGGAAAACAGTCGCCTACAGAAGGAGATTGTGGAAGTGGTGGAAAAGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCGGATTCGGAGAGGCTGGCCCTGAAGCTGCAGAAGGACCTGGAGTTTGTGCTGAAGGACAAGCTGGAGCCAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGCAGGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTCTGCTCCAGTGAGTATAGAAACGGAGCTGATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAGCTGGAGACCAAGGTAAATTACTACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGACATGGAGCAGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGGAGAGGAAGTGCCTGGTCATCGCAGACAGGCTGCTGCTCAGCTGGCACCCACTGTCCTGTGGAGAGCATTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCCCGGCTTAGAAGAGGACGGGCCCTCCCACCACACTGGCCAGGCCACCCCCAGCCTGACAGAAAGTCATCTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCCGGCCGGATGCGGTGGCTCACACCTGTAATCAGCACTTTGGGAGGCCAAGGCGGGAGAGAGGCTGAGGCGGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGGAGAGGGCACTGAAGCTGCAGCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTTGGAGCTTGCCCGCGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAAAGATGGGCTGGTGGCAGGAAGTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCCAGGAGGGCACACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGGAGCGGCCACTGGCCTGGCTGGCCCCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGAGCCCGGCCCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAGCCTGGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCCCGGGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCGAGCACGAAGCTGGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAGATTTGAGAGAGAACGACAGACTGGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTCCATAGACTTTCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTCTGAGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGGAGGTGCTCAACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGCTCAATGTCAGGGTTCTTCAACTG  2220

Query    1  ---------------------------------------------------------ATGTTAACACAGAGCCT  17
                                                                     |||||||||||||||||
Sbjct 2221  GGACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACCATTCAGATGTTAACACAGAGCCT  2294

Query   18  GGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGA  91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGA  2368

Query   92  ATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  ATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG  2442

Query  166  --GGTGTGAGC------GATGGCTGGAGGCACTGGGTCCAGTCCCA------------------CCTGG-----  208
              ||   ||||      || |||| ||||||   ||.||||.||||                  .||||     
Sbjct 2443  CAGG---GAGCTCACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACTTGCAGGAGGTCCGGCTGGTGCCC  2508

Query  209  ---------------GAGCAGCATCACCG---------------------------------------------  222
                           ||||.|||||.||.                                             
Sbjct 2509  CAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACA  2582

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2583  GCGGGAAGAACATGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGAGGCGGAGATGATTCTGAAGAATA  2656

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2657  TGGAAATGCTCCTCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAAAGAACACGAAGTCCGACCTGCTG  2730

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2731  CTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGC  2804

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2805  CGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAG  2878

Query  223  -----------  222
                       
Sbjct 2879  CCCTCTCTGTG  2889

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