Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529197.2
Aligned Length:
2495
Identities:
208
Gaps:
2281

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGAGGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGAGGAAGTGCCTGGTCATCGCAGACAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCTGCTGCTCAGCTGGCACCCACTGTCCTGTGGAGAGCATTGGCCCCGGCTTAGAAGAGGACGGGCCCTCCCAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACACTGGCCAGGCCACCCCCAGCCTGACAGAAAGTCATCTTTCCGGCCGGATGCGGTGGCTCACACCTGTAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGCACTTTGGGAGGCCAAGGCGGGAGAGAGGCTGAGGCGGAGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCGGAGCAGCTGGAGCTGGAGAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATCGTTGGCCCTCGAGGAGGAGGAGTTGGAGCTTGCCCGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGATGCAGGCCCTGCCGAAAGATGGGCTGGTGGCAGGAAGTGGCCAGGAGGGCACACGTGGCCTCCTACCACTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGTCCGGGCTGTGGGGAGCGGCCACTGGCCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCCCCGGCAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAGCCTGGAGCCCGGGAGCTGCCTCTGCTGGGAACAGAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGAGGCTACAGGCCATTCAGGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGGCCCGGGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGGAGAAACATGTAGATTTGAGAGAGAACGACAGACTGGAGTTCCATAGACTTTCTGAAGAAAACACTTTGTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGAACTAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAGGATCAATTATCCCAGCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGCTTCTACCCACCAGGCCCAAAA  1850

Query    1  -------------------------ATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGA  49
                                     |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGAGGAGCATCGTGTGACCATTCAGATGTTAACACAGAGCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGA  1924

Query   50  GTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGG  123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGG  1998

Query  124  TCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG--GGTGTGAGC------GATGGCTGGAGGCAC  189
            ||||||||||||||||||||||||||||||||||||||||||  ||   ||||      || |||| |||||| 
Sbjct 1999  TCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGG---GAGCTCACCTGA-GGCT-GAGGCA-  2066

Query  190  TGGGTCCAGTCCCA------------------CCTGG--------------------GAGCAGCATCACCG---  222
              ||.||||.||||                  .||||                    ||||.|||||.||.   
Sbjct 2067  --GGCCCAGGCCCAGCACTTGCAGGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCT  2138

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2139  CAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACATGAGAAACAGCTGAAAGCCA  2212

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2213  CAGAAGAGCGGGTGGAAGAGGCGGAGATGATTCTGAAGAATATGGAAATGCTCCTCCAAGAGAAAGTGGATAAG  2286

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2287  CTGAAGGAGCAGTTTGAAAAGAACACGAAGTCCGACCTGCTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCT  2360

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2361  GGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAG  2434

Query  223  -----------------------------------------------------  222
                                                                 
Sbjct 2435  TTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTG  2487

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