Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_13803
Subject:
XM_011529198.1
Aligned Length:
2441
Identities:
208
Gaps:
2227

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTAAATTACTACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTTGAGAAGGAGAGGAAGGACATGGAGCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGAGGAGCTCCACGAGAAGTCTCAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGTCATCTGGGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGAGGAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGCCTGGTCATCGCAGACAGGCTGCTGCTCAGCTGGCACCCACTGTCCTGTGGAGAGCATTGGCCCCGGCTTAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGGACGGGCCCTCCCACCACACTGGCCAGGCCACCCCCAGCCTGACAGAAAGTCATCTTTCCGGCCGGATG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGTGGCTCACACCTGTAATCAGCACTTTGGGAGGCCAAGGCGGGAGAGAGGCTGAGGCGGAGCTGAGTGGAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGGAGAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTTGGAGCTTGCCCGCGGGAAGCGAGTGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAAAGATGGGCTGGTGGCAGGAAGTGGCCAGGAGGGCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACGTGGCCTCCTACCACTGCGTCCGGGCTGTGGGGAGCGGCCACTGGCCTGGCTGGCCCCAGGTGATGGCAGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCCGCCCCTGCCCCGGCATCCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAGCCTGGAGCCCGGGAGCTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCAAACTTCTACATC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGGAAGACGTCGTCCGGGCTCTGGAGAAACATGTAGATTTGAGAGAGAACGACAGACTGGAGTTCCATAGACTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCTGAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CGATGCACAGAGGAAGGAAATTGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTCTGAGATGGAGGTGCTCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACAGACAGAATCAGAACTACAAGGATCAATTATCCCAGCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGCT  1776

Query    1  ---------------------------------------------ATGTTAACACAGAGCCTGGAGGAGGTGGT  29
                                                         |||||||||||||||||||||||||||||
Sbjct 1777  TCTACCCACCAGGCCCAAAACGAGGAGCATCGTGTGACCATTCAGATGTTAACACAGAGCCTGGAGGAGGTGGT  1850

Query   30  TCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATC  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TCGCAGTGGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAACTTGAATGCCTGAATCAGGAACATC  1924

Query  104  AGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTG--GGTGTGAGC-  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||   |||| 
Sbjct 1925  AGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGG---GAGCT  1995

Query  175  -----GATGGCTGGAGGCACTGGGTCCAGTCCCA------------------CCTGG-----------------  208
                 || |||| ||||||   ||.||||.||||                  .||||                 
Sbjct 1996  CACCTGA-GGCT-GAGGCA---GGCCCAGGCCCAGCACTTGCAGGAGGTCCGGCTGGTGCCCCAGGACCGTGTG  2064

Query  209  ---GAGCAGCATCACCG---------------------------------------------------------  222
               ||||.|||||.||.                                                         
Sbjct 2065  GCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACA  2138

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2139  TGAGAAACAGCTGAAAGCCACAGAAGAGCGGGTGGAAGAGGCGGAGATGATTCTGAAGAATATGGAAATGCTCC  2212

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2213  TCCAAGAGAAAGTGGATAAGCTGAAGGAGCAGTTTGAAAAGAACACGAAGTCCGACCTGCTGCTGAAGGAGCTG  2286

Query  223  --------------------------------------------------------------------------  222
                                                                                      
Sbjct 2287  TACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAG  2360

Query  223  -------------------------------------------------------------------------  222
                                                                                     
Sbjct 2361  CCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTG  2433

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